Os02g0197400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0197400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.93 | 0.448 | 5.46 | 0.397 | 0.323 | 0.971 | 0.69 | 1.57 | 0.0641 | 14.7 | 24 | 115 | -- | -- |
| 93.7 | 0.454 | 5.43 | 0.596 | 0.323 | 0.761 | 0.242 | -- | 0.113 | 14.6 | 24.5 | 105 | -- | -- |
| 92.4 | 0.448 | 5.46 | 0.429 | 0.329 | 0.955 | -- | 1.39 | 0.0822 | 14.7 | 24.1 | 120 | -- | -- |
| 93.89 | 0.451 | 5.43 | 0.611 | 0.311 | 0.78 | -- | -- | 0.114 | 14.9 | 24.39 | 107 | -- | -- |
| 97.64 | 0.46 | 5.47 | 0.418 | -- | 0.765 | -- | 1.22 | 0.0403 | -- | 24.02 | 238 | -- | -- |
| 102.17 | 0.474 | 5.47 | 0.421 | 0.2 | -- | 0.256 | -- | -0.0227 | 15.5 | -- | -- | -- | -- |
| 102.38 | 0.474 | 5.47 | 0.426 | 0.201 | -- | -- | -- | -0.0212 | 15.5 | -- | -- | -- | -- |
| 98.95 | 0.463 | 5.44 | 0.564 | -- | 0.618 | -- | -- | 0.073 | -- | 24.14 | 119 | -- | -- |
| 102.57 | 0.474 | 5.46 | -- | 0.275 | 0.533 | -- | -- | 0.0131 | 14.7 | 24.5 | 70 | -- | -- |
| 104.64 | 0.478 | 5.47 | 0.417 | -- | -- | -- | -- | -0.0266 | -- | -- | -- | -- | -- |
| 107.15 | 0.484 | 5.48 | -- | 0.193 | -- | -- | -- | -0.0686 | 15.6 | -- | -- | -- | -- |
| 106.47 | 0.482 | 5.46 | -- | -- | 0.397 | -- | -- | -0.0188 | -- | 24.1 | 69 | -- | -- |
| 109.23 | 0.488 | 5.48 | -- | -- | -- | -- | -- | -0.0729 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.10 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 22 |
| 4 | 90.28 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 22 |
| 5 | 90.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 7 | 90.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 9 | 90.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 53 | 91.00 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 14 |
| 64 | 91.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 71 | 91.16 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 14 |
| 82 | 91.25 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 15 |
| 86 | 91.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 87 | 91.33 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 23 |
| 88 | 91.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 116 | 91.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 120 | 91.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 121 | 91.52 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 122 | 91.53 | temperature | 25 | 10 | < th | dose dependent | sin | 8 | NA |
| 134 | 91.56 | temperature | 25 | 90 | < th | dose dependent | sin | 9 | NA |
| 175 | 91.67 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 177 | 91.68 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 194 | 91.73 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 204 | 91.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 206 | 91.74 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 208 | 91.75 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 209 | 91.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 241 | 91.81 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 261 | 91.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 267 | 91.86 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 284 | 91.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 321 | 91.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 323 | 91.97 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 372 | 92.03 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 9 |
| 383 | 92.05 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 412 | 92.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 507 | 92.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 653 | 92.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 662 | 92.53 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 677 | 92.55 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 711 | 92.61 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 23 |
| 716 | 92.62 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 8 |
| 743 | 92.65 | temperature | 10 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 775 | 92.70 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 867 | 92.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 868 | 92.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 873 | 92.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 881 | 92.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 888 | 92.84 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 16 |
| 952 | 92.89 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 10 |
| 978 | 92.91 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 14 |
| 982 | 92.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 986 | 92.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 17 |