Os02g0197200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mlo-related protein family protein.
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Os02g0197200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mlo-related protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.79 | 0.381 | 13.5 | -1.27 | 2.68 | -2.17 | 1.42 | 0.0815 | -0.314 | 9.72 | 3.547 | 279 | 3.31 | 15.6 |
| 65.76 | 0.378 | 13.5 | -1.28 | 2.69 | -2.17 | 1.46 | -- | -0.316 | 9.72 | 3.626 | 274 | 3.34 | 15.5 |
| 70.68 | 0.392 | 13.5 | -1.16 | 2.73 | -2.18 | -- | 1.17 | -0.297 | 9.68 | 3.161 | 270 | 3.32 | 15.4 |
| 73.77 | 0.4 | 13.5 | -1.23 | 2.71 | -2.16 | -- | -- | -0.319 | 9.7 | 2.573 | 271 | 3.32 | 15.5 |
| 94.38 | 0.452 | 13.6 | -0.995 | -- | -2.98 | -- | -0.103 | -0.212 | -- | -4.165 | 733 | 5.15 | 15.9 |
| 105.38 | 0.481 | 13.6 | -1.49 | 2.52 | -- | 1.59 | -- | -0.484 | 7.15 | -- | -- | -- | -- |
| 112.04 | 0.496 | 13.6 | -1.46 | 2.53 | -- | -- | -- | -0.488 | 7.1 | -- | -- | -- | -- |
| 78.31 | 0.412 | 13.6 | -1.05 | -- | -3.49 | -- | -- | -0.256 | -- | -19.55 | 915 | 3.43 | 15.5 |
| 110.88 | 0.49 | 13.5 | -- | 2.49 | -2.28 | -- | -- | -0.153 | 9.7 | 11.15 | 282 | 3.3 | 15.7 |
| 448.88 | 0.99 | 13.6 | -1.41 | -- | -- | -- | -- | -0.443 | -- | -- | -- | -- | -- |
| 168.15 | 0.607 | 13.5 | -- | 2.51 | -- | -- | -- | -0.326 | 7.14 | -- | -- | -- | -- |
| 109.73 | 0.488 | 13.5 | -- | -- | -3.64 | -- | -- | -0.143 | -- | -17.1 | 937 | 3.09 | 15.8 |
| 501.35 | 1.05 | 13.6 | -- | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 4 | 69.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 15 | 70.87 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 17 | 71.19 | radiation | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 21 | 71.37 | radiation | 1.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 27 | 71.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 39 | 72.32 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 55 | 73.13 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 72 | 73.86 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 87 | 74.02 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 153 | 75.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 168 | 75.53 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 171 | 75.56 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 172 | 75.58 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 14 |
| 175 | 75.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 182 | 75.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 192 | 76.01 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 199 | 76.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 201 | 76.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 207 | 76.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 244 | 76.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 18 |
| 267 | 76.79 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 275 | 76.85 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 278 | 76.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 279 | 76.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 282 | 76.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 284 | 76.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 285 | 76.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 287 | 76.91 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 290 | 76.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 291 | 76.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 309 | 77.00 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 327 | 77.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 359 | 77.33 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 369 | 77.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 370 | 77.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 374 | 77.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 383 | 77.54 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 426 | 77.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 427 | 77.80 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 435 | 77.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 446 | 77.99 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 471 | 78.16 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 480 | 78.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 491 | 78.32 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 511 | 78.48 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 516 | 78.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 2 |
| 518 | 78.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 524 | 78.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 526 | 78.56 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 528 | 78.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 558 | 78.62 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 584 | 78.71 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 625 | 78.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 628 | 78.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 631 | 78.99 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 640 | 79.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 643 | 79.07 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 669 | 79.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 5 |
| 671 | 79.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 677 | 79.22 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 682 | 79.26 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 686 | 79.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 687 | 79.28 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 719 | 79.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 734 | 79.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 735 | 79.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 736 | 79.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 737 | 79.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 743 | 79.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 759 | 79.62 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 777 | 79.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 778 | 79.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 789 | 79.78 | humidity | 90.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 791 | 79.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 793 | 79.79 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 795 | 79.79 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 797 | 79.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 810 | 79.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 811 | 79.84 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 836 | 79.93 | temperature | 20.0 | 270 | > th | dose dependent | sin | 20 | NA |
| 843 | 79.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 845 | 79.94 | wind | 9.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 846 | 79.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 851 | 79.98 | temperature | 25.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 855 | 80.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 862 | 80.03 | temperature | 25.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 863 | 80.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 865 | 80.04 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 868 | 80.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 870 | 80.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 871 | 80.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 873 | 80.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 894 | 80.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 19 |
| 897 | 80.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 19 |
| 961 | 80.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 964 | 80.31 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 970 | 80.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 21 |