Os02g0195900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0195900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.42 | 0.582 | 6.53 | 1.78 | 0.344 | 2.4 | 2.27 | -0.955 | -0.0238 | 6.87 | 26.02 | 834 | -- | -- |
| 154.41 | 0.579 | 6.56 | 1.61 | 0.344 | 2.49 | 2.16 | -- | -0.0651 | 6.68 | 25.73 | 833 | -- | -- |
| 163.48 | 0.595 | 6.49 | 2.02 | 0.688 | 2.38 | -- | -1.62 | 0.0233 | 8.38 | 27.29 | 1240 | -- | -- |
| 163.74 | 0.596 | 6.51 | 1.98 | 0.636 | 2.32 | -- | -- | 0.0296 | 8.49 | 25.03 | 2456 | -- | -- |
| 168.67 | 0.605 | 6.57 | 1.8 | -- | 2.65 | -- | -1.01 | -0.14 | -- | 33.1 | 733 | -- | -- |
| 244.76 | 0.733 | 6.67 | 0.896 | 0.744 | -- | 1.2 | -- | -0.615 | 8.83 | -- | -- | -- | -- |
| 248.49 | 0.738 | 6.67 | 0.942 | 0.74 | -- | -- | -- | -0.611 | 9.56 | -- | -- | -- | -- |
| 169.55 | 0.606 | 6.58 | 1.63 | -- | 2.66 | -- | -- | -0.158 | -- | 32.36 | 733 | -- | -- |
| 228.06 | 0.703 | 6.59 | -- | 0.77 | 1.75 | -- | -- | -0.366 | 8.47 | 25.7 | 1233 | -- | -- |
| 280.85 | 0.783 | 6.69 | 0.937 | -- | -- | -- | -- | -0.609 | -- | -- | -- | -- | -- |
| 271.9 | 0.771 | 6.69 | -- | 0.739 | -- | -- | -- | -0.716 | 9.47 | -- | -- | -- | -- |
| 230.99 | 0.708 | 6.65 | -- | -- | 2.06 | -- | -- | -0.457 | -- | 34.1 | 666 | -- | -- |
| 304 | 0.814 | 6.71 | -- | -- | -- | -- | -- | -0.713 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 6 | 144.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 16 | 145.79 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 29 | 147.05 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 128 | 151.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 130 | 151.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 145 | 151.72 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 152 | 151.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 154 | 151.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 167 | 151.95 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 172 | 152.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 9 |
| 176 | 152.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 233 | 152.34 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 248 | 152.41 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 302 | 152.70 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 342 | 152.88 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 355 | 152.93 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 465 | 153.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 466 | 153.45 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 521 | 153.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 587 | 154.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 623 | 154.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 737 | 155.08 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 813 | 155.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 836 | 155.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 871 | 156.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 951 | 156.49 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |