Os02g0195800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 6 (AtJ6) (AtDjC6).
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Os02g0195800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 6 (AtJ6) (AtDjC6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.43 | 0.212 | 10.1 | -0.0507 | 0.285 | -0.311 | 0.0883 | 0.312 | 0.141 | 10.6 | 20.12 | 30 | -- | -- |
| 20.7 | 0.212 | 10.1 | -0.0418 | 0.28 | -0.307 | 0.279 | -- | 0.147 | 10.7 | 20.22 | 30 | -- | -- |
| 20.45 | 0.211 | 10.1 | -0.048 | 0.284 | -0.308 | -- | 0.361 | 0.139 | 10.5 | 20.12 | 30 | -- | -- |
| 21.06 | 0.214 | 10.1 | -0.0443 | 0.289 | -0.31 | -- | -- | 0.14 | 10.6 | 20.23 | 30 | -- | -- |
| 23.26 | 0.225 | 10.1 | -0.103 | -- | -0.201 | -- | 0.369 | 0.141 | -- | 29.7 | 113 | -- | -- |
| 24.3 | 0.231 | 10.1 | -0.0749 | 0.132 | -- | 0.0503 | -- | 0.121 | 7.36 | -- | -- | -- | -- |
| 24.31 | 0.231 | 10.1 | -0.074 | 0.132 | -- | -- | -- | 0.121 | 7.16 | -- | -- | -- | -- |
| 23.58 | 0.226 | 10.1 | -0.0807 | -- | -0.204 | -- | -- | 0.13 | -- | 30 | 112 | -- | -- |
| 21.1 | 0.214 | 10.1 | -- | 0.288 | -0.31 | -- | -- | 0.144 | 10.6 | 20.21 | 30 | -- | -- |
| 25.23 | 0.235 | 10.1 | -0.0716 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 24.45 | 0.231 | 10.1 | -- | 0.131 | -- | -- | -- | 0.129 | 7.2 | -- | -- | -- | -- |
| 23.73 | 0.227 | 10.1 | -- | -- | -0.194 | -- | -- | 0.134 | -- | 30 | 112 | -- | -- |
| 25.37 | 0.235 | 10.1 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.73 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 7 | 19.85 | radiation | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 9 | 19.91 | radiation | 30 | 30 | < th | dose dependent | rect. | 5 | 7 |
| 12 | 19.94 | radiation | 20 | 30 | > th | dose independent | rect. | 15 | 23 |
| 17 | 20.00 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 15 |
| 28 | 20.08 | radiation | 20 | 30 | < th | dose independent | rect. | 5 | 7 |
| 37 | 20.11 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 53 | 20.18 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 74 | 20.28 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 12 |
| 77 | 20.29 | radiation | 20 | 30 | < th | dose independent | rect. | 5 | 19 |
| 84 | 20.31 | radiation | 20 | 30 | > th | dose independent | sin | 2 | NA |
| 85 | 20.31 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 12 |
| 94 | 20.33 | radiation | 20 | 10 | < th | dose independent | rect. | 5 | 12 |
| 134 | 20.43 | radiation | 1 | 30 | > th | dose dependent | rect. | 7 | 12 |
| 152 | 20.45 | radiation | 20 | 30 | > th | dose independent | no | NA | NA |
| 153 | 20.45 | radiation | 20 | 30 | > th | dose independent | rect. | 7 | 10 |
| 232 | 20.45 | radiation | 20 | 30 | < th | dose independent | rect. | 5 | 21 |
| 286 | 20.47 | radiation | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 293 | 20.49 | radiation | 40 | 30 | < th | dose independent | rect. | 5 | 15 |
| 294 | 20.49 | humidity | 60 | 270 | > th | dose independent | rect. | 13 | 18 |
| 295 | 20.49 | radiation | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 301 | 20.50 | radiation | 1 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 306 | 20.50 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 307 | 20.50 | radiation | 40 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 310 | 20.51 | humidity | 60 | 10 | > th | dose dependent | sin | 0 | NA |
| 326 | 20.51 | radiation | 1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 332 | 20.52 | radiation | 20 | 90 | < th | dose independent | rect. | 13 | 22 |
| 380 | 20.56 | radiation | 30 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 384 | 20.57 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 20 |
| 396 | 20.58 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 401 | 20.59 | radiation | 10 | 270 | > th | dose independent | sin | 4 | NA |
| 422 | 20.59 | temperature | 10 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 429 | 20.60 | radiation | 10 | 270 | > th | dose independent | rect. | 16 | 21 |
| 431 | 20.60 | radiation | 10 | 270 | < th | dose dependent | sin | 2 | NA |
| 432 | 20.60 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 522 | 20.64 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 530 | 20.65 | radiation | 1 | 90 | > th | dose dependent | sin | 1 | NA |
| 580 | 20.69 | radiation | 20 | 30 | < th | dose independent | sin | 2 | NA |
| 750 | 20.72 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 761 | 20.74 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 20 |
| 781 | 20.75 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 7 |
| 784 | 20.75 | humidity | 80 | 10 | < th | dose independent | rect. | 8 | 8 |
| 823 | 20.75 | humidity | 70 | 10 | > th | dose independent | rect. | 14 | 20 |
| 841 | 20.75 | radiation | 1 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 843 | 20.76 | radiation | 20 | 30 | < th | dose independent | no | NA | NA |
| 848 | 20.76 | radiation | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 850 | 20.76 | radiation | 20 | 30 | < th | dose independent | rect. | 15 | 23 |
| 894 | 20.78 | radiation | 40 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 922 | 20.80 | humidity | 70 | 10 | > th | dose independent | rect. | 12 | 22 |
| 925 | 20.80 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 992 | 20.81 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 19 |