Os02g0195700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0195700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.44 | 0.545 | 6.93 | -0.0949 | 1.56 | -1.05 | -0.555 | 0.0704 | -1.04 | 12 | 39.21 | 1288 | -- | -- |
| 134.43 | 0.54 | 6.93 | -0.09 | 1.56 | -1.04 | -0.547 | -- | -1.04 | 12 | 39.2 | 1288 | -- | -- |
| 135.72 | 0.543 | 6.93 | -0.105 | 1.57 | -1.05 | -- | -0.0757 | -1.04 | 12 | 39.2 | 1288 | -- | -- |
| 135.73 | 0.543 | 6.93 | -0.111 | 1.57 | -1.05 | -- | -- | -1.04 | 12 | 39.2 | 1288 | -- | -- |
| 254.68 | 0.743 | 6.98 | -0.259 | -- | -1.01 | -- | 0.313 | -1.08 | -- | 45.84 | 1792 | -- | -- |
| 160.56 | 0.594 | 6.89 | -0.0323 | 1.4 | -- | -0.61 | -- | -0.841 | 12 | -- | -- | -- | -- |
| 162.16 | 0.596 | 6.89 | -0.0568 | 1.41 | -- | -- | -- | -0.844 | 12 | -- | -- | -- | -- |
| 254.53 | 0.743 | 6.98 | -0.163 | -- | -1.12 | -- | -- | -1.07 | -- | 46.93 | 1792 | -- | -- |
| 136.07 | 0.543 | 6.92 | -- | 1.57 | -1.05 | -- | -- | -1.03 | 12 | 39.21 | 1288 | -- | -- |
| 286.53 | 0.791 | 6.92 | -0.1 | -- | -- | -- | -- | -0.864 | -- | -- | -- | -- | -- |
| 162.25 | 0.596 | 6.89 | -- | 1.41 | -- | -- | -- | -0.838 | 12 | -- | -- | -- | -- |
| 254.99 | 0.744 | 6.97 | -- | -- | -1.1 | -- | -- | -1.07 | -- | 46.87 | 1786 | -- | -- |
| 286.8 | 0.79 | 6.91 | -- | -- | -- | -- | -- | -0.853 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 4 | 131.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 6 | 131.98 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 8 |
| 17 | 133.56 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 20 |
| 33 | 134.65 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 34 | 134.66 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 36 | 134.71 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 94 | 135.93 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 98 | 136.00 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 102 | 136.12 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 105 | 136.17 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 117 | 136.50 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 121 | 136.63 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 134 | 136.84 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 136 | 136.92 | humidity | 70.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 137 | 136.93 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 20 |
| 138 | 136.95 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 141 | 137.01 | temperature | 25.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 147 | 137.13 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 153 | 137.32 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 157 | 137.40 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 198 | 137.71 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 211 | 138.04 | radiation | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 216 | 138.09 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 217 | 138.10 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 15 | 4 |
| 222 | 138.15 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 227 | 138.19 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 245 | 138.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 246 | 138.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 247 | 138.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 251 | 138.25 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 272 | 138.29 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 280 | 138.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 285 | 138.38 | radiation | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 295 | 138.44 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 298 | 138.46 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 304 | 138.49 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 337 | 138.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 342 | 138.72 | humidity | 80.0 | 10 | < th | dose independent | rect. | 15 | 4 |
| 343 | 138.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 344 | 138.75 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 350 | 138.79 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 4 |
| 360 | 138.87 | radiation | 20.0 | 270 | > th | dose independent | rect. | 13 | 19 |
| 363 | 138.89 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 364 | 138.91 | radiation | 20.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 367 | 138.96 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 22 |
| 396 | 139.03 | radiation | 40.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 402 | 139.11 | humidity | 50.0 | 10 | > th | dose independent | rect. | 19 | 20 |
| 405 | 139.12 | radiation | 1.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 422 | 139.14 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 15 |
| 424 | 139.18 | radiation | 1.0 | 90 | > th | dose independent | sin | 15 | NA |
| 431 | 139.22 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 436 | 139.26 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 2 |
| 443 | 139.34 | radiation | 30.0 | 270 | < th | dose independent | sin | 13 | NA |
| 448 | 139.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 512 | 139.58 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 517 | 139.61 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 15 | 17 |
| 521 | 139.63 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 522 | 139.64 | radiation | 40.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 550 | 139.75 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 570 | 139.81 | radiation | 30.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 606 | 139.85 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 623 | 139.91 | radiation | 40.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 636 | 139.96 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 652 | 139.99 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 22 |
| 660 | 140.04 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 664 | 140.05 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 686 | 140.07 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 704 | 140.14 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 15 | 4 |
| 738 | 140.25 | radiation | 40.0 | 1440 | > th | dose dependent | no | NA | NA |
| 739 | 140.25 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 8 |
| 938 | 140.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 2 |
| 939 | 140.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 941 | 140.37 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 942 | 140.37 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 945 | 140.37 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 972 | 140.39 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 973 | 140.39 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 996 | 140.40 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 23 |