FiT-DB / Search/ Help/ Sample detail

Os02g0195300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein DnaJ, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0141) R2 : 0.0674
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0296) R2dN8 : 0.0871 R2N8 : 0.0674
σ : 0.265
deviance : 32.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.29 0.178 10.4 -0.338 0.478 -0.336 0.039 0.455 0.0623 23.4 21.8 2747 -- --
14.44 0.177 10.4 -0.291 0.487 -0.476 -0.0536 -- 0.0761 23.5 20.58 2890 -- --
14.3 0.176 10.4 -0.338 0.48 -0.337 -- 0.45 0.0615 23.4 21.82 2799 -- --
14.39 0.177 10.4 -0.301 0.486 -0.522 -- -- 0.0792 23.5 20.18 2935 -- --
27.57 0.245 10.4 -0.372 -- -0.436 -- 0.47 0.0184 -- 26.6 2361 -- --
16.98 0.193 10.4 -0.103 0.488 -- 0.0105 -- 0.155 23.6 -- -- -- --
16.98 0.193 10.4 -0.103 0.488 -- -- -- 0.155 23.6 -- -- -- --
26.01 0.238 10.4 -0.265 -- -0.609 -- -- 0.0223 -- 28.3 869 -- --
15.87 0.186 10.4 -- 0.484 -0.333 -- -- 0.12 23.5 22.8 1478 -- --
31.96 0.264 10.4 -0.0896 -- -- -- -- 0.16 -- -- -- -- --
17.26 0.194 10.4 -- 0.487 -- -- -- 0.166 23.5 -- -- -- --
27.62 0.245 10.4 -- -- -0.495 -- -- 0.0805 -- 28.53 850 -- --
32.17 0.265 10.4 -- -- -- -- -- 0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.53 wind 9 43200 > th dose independent rect. 9 5
2 13.53 wind 9 43200 < th dose independent rect. 9 5
3 13.55 wind 1 14400 > th dose independent rect. 23 3
4 13.57 wind 9 43200 > th dose independent rect. 8 8
5 13.58 wind 9 43200 < th dose independent rect. 8 7
9 13.58 wind 9 43200 > th dose dependent rect. 10 6
11 13.58 wind 9 43200 > th dose dependent rect. 10 11
19 13.61 wind 9 43200 > th dose independent sin 0 NA
20 13.61 wind 1 14400 < th dose independent rect. 23 3
37 13.63 temperature 20 14400 > th dose independent rect. 21 1
38 13.63 temperature 20 14400 < th dose independent rect. 21 1
44 13.63 wind 9 43200 > th dose independent rect. 7 14
54 13.63 wind 9 43200 > th dose independent rect. 20 21
55 13.63 wind 9 43200 < th dose independent rect. 20 21
58 13.64 wind 9 43200 < th dose independent sin 0 NA
104 13.65 wind 7 43200 > th dose dependent rect. 8 8
125 13.66 wind 9 43200 < th dose independent rect. 6 18
143 13.66 wind 9 43200 > th dose dependent sin 18 NA
144 13.66 wind 1 43200 > th dose dependent rect. 21 3
145 13.66 wind 9 43200 < th dose dependent rect. 21 3
151 13.67 wind 9 43200 > th dose independent no NA NA
200 13.67 wind 9 43200 > th dose independent rect. 10 23
232 13.68 wind 9 43200 > th dose independent rect. 13 23
236 13.68 humidity 80 14400 > th dose dependent rect. 5 1
270 13.69 wind 9 43200 < th dose independent rect. 23 22
275 13.69 wind 7 43200 > th dose dependent sin 0 NA
276 13.69 wind 1 43200 > th dose dependent rect. 22 1
282 13.69 atmosphere 995 43200 < th dose dependent rect. 11 16
283 13.70 wind 9 43200 < th dose independent no NA NA
305 13.70 wind 9 43200 > th dose independent rect. 13 21
335 13.70 wind 7 43200 > th dose dependent rect. 6 18
353 13.71 wind 9 43200 < th dose independent rect. 10 23
354 13.71 wind 9 43200 < th dose independent rect. 13 23
360 13.71 wind 1 14400 < th dose dependent rect. 23 3
382 13.72 humidity 90 14400 < th dose independent rect. 23 1
404 13.72 wind 9 43200 > th dose dependent rect. 13 19
411 13.72 wind 7 43200 > th dose dependent rect. 20 21
424 13.73 wind 9 43200 < th dose independent rect. 13 21
446 13.73 atmosphere 995 43200 < th dose dependent rect. 10 19
458 13.74 humidity 90 14400 > th dose independent rect. 23 1
511 13.75 atmosphere 995 43200 < th dose independent rect. 23 16
516 13.75 wind 7 43200 > th dose dependent no NA NA
538 13.75 wind 7 43200 > th dose dependent rect. 12 23
571 13.77 wind 3 43200 > th dose independent rect. 21 1
573 13.77 wind 9 43200 > th dose independent rect. 10 3
582 13.77 atmosphere 995 43200 < th dose dependent sin 17 NA
587 13.77 wind 7 43200 > th dose dependent rect. 15 23
602 13.78 atmosphere 995 43200 < th dose dependent rect. 12 13
610 13.79 wind 3 43200 < th dose independent rect. 21 1
612 13.79 wind 5 43200 < th dose independent rect. 17 12
621 13.79 wind 7 43200 > th dose dependent rect. 15 18
629 13.80 wind 7 43200 > th dose independent rect. 15 18
638 13.80 humidity 80 14400 > th dose dependent rect. 2 5
645 13.81 atmosphere 995 43200 < th dose independent sin 5 NA
647 13.81 wind 3 43200 > th dose independent rect. 20 3
651 13.81 wind 7 43200 < th dose independent rect. 15 18
660 13.81 wind 1 43200 > th dose dependent rect. 18 9
671 13.82 wind 3 43200 < th dose independent rect. 20 3
675 13.82 wind 5 43200 > th dose independent rect. 17 12
690 13.82 wind 9 43200 < th dose dependent rect. 18 9
692 13.82 wind 3 43200 > th dose dependent rect. 17 11
697 13.83 wind 1 14400 > th dose independent rect. 24 1
734 13.84 wind 9 43200 < th dose independent rect. 10 3
746 13.84 temperature 20 30 > th dose independent rect. 12 21
789 13.85 humidity 50 43200 > th dose dependent rect. 20 1
849 13.87 humidity 60 43200 > th dose dependent rect. 19 4
857 13.87 humidity 80 14400 > th dose dependent rect. 23 8
871 13.87 wind 3 43200 > th dose dependent rect. 5 19
908 13.88 wind 3 43200 > th dose dependent sin 13 NA
909 13.88 wind 9 43200 < th dose dependent sin 13 NA
914 13.88 humidity 60 43200 > th dose dependent rect. 18 6
951 13.88 wind 3 43200 > th dose dependent rect. 22 22
956 13.89 wind 7 43200 < th dose independent sin 13 NA
957 13.89 atmosphere 995 43200 > th dose independent sin 5 NA
969 13.89 wind 3 43200 > th dose independent rect. 7 17
979 13.89 wind 3 43200 > th dose dependent no NA NA
999 13.89 wind 3 43200 > th dose dependent rect. 6 13