Os02g0193500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0193500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.62 | 0.512 | 6.31 | -0.195 | 0.845 | 1.14 | -0.164 | -1.71 | -0.426 | 5.56 | 25.3 | 96 | -- | -- |
| 119.6 | 0.509 | 6.28 | -0.0131 | 0.85 | 1.04 | 0.0264 | -- | -0.38 | 5.54 | 25.3 | 101 | -- | -- |
| 118.66 | 0.507 | 6.3 | -0.18 | 0.843 | 1.15 | -- | -1.6 | -0.416 | 5.56 | 25.43 | 97 | -- | -- |
| 119.55 | 0.509 | 6.28 | 0.00438 | 0.83 | 1.01 | -- | -- | -0.366 | 5.61 | 25.47 | 102 | -- | -- |
| 143.37 | 0.561 | 6.3 | -0.0387 | -- | 0.636 | -- | -1.65 | -0.344 | -- | 26.35 | 45 | -- | -- |
| 135.37 | 0.545 | 6.27 | 0.165 | 0.516 | -- | -0.248 | -- | -0.309 | 7.04 | -- | -- | -- | -- |
| 135.53 | 0.545 | 6.27 | 0.161 | 0.515 | -- | -- | -- | -0.308 | 7.1 | -- | -- | -- | -- |
| 144.17 | 0.562 | 6.28 | 0.109 | -- | 0.515 | -- | -- | -0.308 | -- | 26.5 | 44 | -- | -- |
| 119.54 | 0.509 | 6.28 | -- | 0.831 | 1 | -- | -- | -0.367 | 5.68 | 25.45 | 106 | -- | -- |
| 149.53 | 0.571 | 6.28 | 0.171 | -- | -- | -- | -- | -0.299 | -- | -- | -- | -- | -- |
| 136.21 | 0.546 | 6.27 | -- | 0.517 | -- | -- | -- | -0.326 | 7.08 | -- | -- | -- | -- |
| 144.48 | 0.562 | 6.29 | -- | -- | 0.53 | -- | -- | -0.321 | -- | 26.46 | 41 | -- | -- |
| 150.29 | 0.572 | 6.28 | -- | -- | -- | -- | -- | -0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 2 | 113.24 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 3 | 113.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 7 | 113.95 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 14 | 114.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 15 | 114.56 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 19 | 114.63 | humidity | 70 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 21 | 114.69 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 23 | 114.74 | humidity | 70 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 25 | 114.78 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 30 | 114.81 | humidity | 70 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 42 | 114.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 43 | 114.90 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 57 | 114.97 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 64 | 115.01 | humidity | 70 | 14400 | > th | dose dependent | sin | 13 | NA |
| 86 | 115.09 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 93 | 115.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 99 | 115.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 136 | 115.23 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 138 | 115.23 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 158 | 115.28 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 17 |
| 183 | 115.32 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 184 | 115.32 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 198 | 115.35 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 225 | 115.40 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 245 | 115.43 | humidity | 80 | 14400 | > th | dose independent | sin | 16 | NA |
| 336 | 115.58 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 342 | 115.59 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 21 |
| 394 | 115.64 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 399 | 115.64 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 419 | 115.67 | humidity | 80 | 14400 | < th | dose independent | sin | 16 | NA |
| 428 | 115.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 435 | 115.69 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 448 | 115.70 | temperature | 25 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 450 | 115.71 | humidity | 80 | 14400 | > th | dose independent | no | NA | NA |
| 469 | 115.73 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 492 | 115.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 497 | 115.77 | humidity | 80 | 14400 | < th | dose independent | no | NA | NA |
| 543 | 115.80 | humidity | 70 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 547 | 115.81 | humidity | 70 | 14400 | > th | dose dependent | no | NA | NA |
| 566 | 115.83 | humidity | 70 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 638 | 115.88 | humidity | 70 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 656 | 115.90 | humidity | 90 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 697 | 115.93 | humidity | 70 | 14400 | > th | dose dependent | rect. | 22 | 23 |
| 800 | 116.04 | humidity | 90 | 14400 | < th | dose dependent | rect. | 17 | 9 |
| 862 | 116.09 | humidity | 90 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 951 | 116.18 | humidity | 90 | 14400 | < th | dose dependent | sin | 14 | NA |
| 960 | 116.18 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 962 | 116.18 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 985 | 116.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |