Os02g0192200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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Os02g0192200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.76 | 0.181 | 10 | 0.794 | 0.217 | 0.42 | 0.0559 | 0.0847 | 0.0701 | 11.4 | 24.79 | 1647 | -- | -- |
| 14.73 | 0.179 | 10 | 0.776 | 0.225 | 0.443 | 0.0458 | -- | 0.0717 | 11.1 | 25.18 | 1752 | -- | -- |
| 14.75 | 0.179 | 10 | 0.816 | 0.226 | 0.421 | -- | 0.157 | 0.0782 | 11.1 | 25.01 | 1740 | -- | -- |
| 14.74 | 0.179 | 10 | 0.777 | 0.226 | 0.446 | -- | -- | 0.0724 | 11 | 25.2 | 1762 | -- | -- |
| 17.72 | 0.196 | 10 | 0.793 | -- | 0.402 | -- | 0.0621 | 0.0672 | -- | 24.69 | 1634 | -- | -- |
| 21.18 | 0.216 | 10 | 0.912 | 0.201 | -- | 0.0448 | -- | 0.119 | 11.8 | -- | -- | -- | -- |
| 21.18 | 0.216 | 10 | 0.914 | 0.201 | -- | -- | -- | 0.119 | 11.7 | -- | -- | -- | -- |
| 17.72 | 0.196 | 10 | 0.765 | -- | 0.413 | -- | -- | 0.0537 | -- | 24.22 | 1634 | -- | -- |
| 29 | 0.251 | 10.1 | -- | 0.202 | 0.614 | -- | -- | -0.0695 | 10.5 | 23.23 | 1705 | -- | -- |
| 23.73 | 0.228 | 10 | 0.908 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 43.2 | 0.307 | 10 | -- | 0.191 | -- | -- | -- | 0.0176 | 11.4 | -- | -- | -- | -- |
| 22.61 | 0.221 | 10.1 | -- | -- | 0.752 | -- | -- | -0.219 | -- | 14.24 | 47520 | -- | -- |
| 45.48 | 0.315 | 10 | -- | -- | -- | -- | -- | 0.0162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.25 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 9 | 14.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 18 |
| 26 | 14.62 | temperature | 25 | 720 | > th | dose dependent | sin | 8 | NA |
| 29 | 14.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 72 | 14.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 84 | 14.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 147 | 14.88 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 219 | 14.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 270 | 14.95 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 296 | 14.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 297 | 14.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 487 | 15.03 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 518 | 15.04 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 19 |
| 573 | 15.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 606 | 15.07 | temperature | 30 | 720 | < th | dose independent | sin | 10 | NA |
| 808 | 15.14 | temperature | 30 | 720 | > th | dose independent | sin | 10 | NA |
| 841 | 15.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 953 | 15.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |