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Os02g0191800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.58 (0.0892) R2 : 0.526
β1 : -4.72 (0.592) R2dD : 0.671 R2D : -0.831
β2 : 1.4 (0.133) R2dC : 0.113 R2C : 0.00221
β3 : 1.28 (0.326) R2dE : 0.0633 R2E : -0.302
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -25.5 (2.36) R2dD*E : 1.35 R2D*E : -0.219
γ1 : 0.142 (0.166) R2dN8 : 0.00178 R2N8 : -0.0759
σ : 0.972
deviance : 435.63
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C
peak time of C : 7.66
E
wheather : temperature
threshold : 26
memory length : 4300
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 9.35
open length of G : 1.92

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
430.93 0.975 9.58 -4.84 1.38 1.2 1.48 -25 0.0933 7.84 25.76 4324 9.33 1.9
622.7 1.16 8.61 2.89 1.29 -1.99 1.37 -- 2.22 8.16 -26.3 47520 0.867 3.35
435.63 0.972 9.58 -4.72 1.4 1.28 -- -25.5 0.142 7.66 26 4300 9.35 1.92
519.1 1.06 8.57 3.2 1.29 -2.47 -- -- 2.51 7.91 27.99 47520 5.45 4.67
539.58 1.08 9.6 -4.85 -- 1.39 -- -26.3 0.168 -- 26.2 4320 9.35 2.05
656.52 1.2 8.8 0.675 1.35 -- 1.46 -- 1.4 8.2 -- -- -- --
662.81 1.21 8.8 0.714 1.35 -- -- -- 1.39 8.01 -- -- -- --
610.32 1.15 8.59 3.09 -- -2.51 -- -- 2.51 -- 28.4 47520 6.97 4.53
580.83 1.12 8.56 -- 1.5 -1.6 -- -- 2.53 8.15 27.25 14409 6.4 4.8
762.6 1.29 8.84 0.728 -- -- -- -- 1.41 -- -- -- -- --
676.27 1.22 8.82 -- 1.36 -- -- -- 1.31 7.98 -- -- -- --
622.61 1.16 8.64 -- -- -2.01 -- -- 2.29 -- 31.81 21225 6.63 3.84
776.56 1.3 8.85 -- -- -- -- -- 1.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 425.84 temperature 25 14400 > th dose dependent rect. 8 1
2 425.94 temperature 25 14400 > th dose dependent rect. 6 5
26 429.95 temperature 25 14400 > th dose dependent rect. 24 12
43 431.27 temperature 25 14400 > th dose dependent sin 6 NA
52 431.88 temperature 30 14400 < th dose independent rect. 13 1
55 432.00 temperature 30 14400 < th dose independent rect. 5 9
56 432.01 temperature 30 14400 < th dose independent rect. 8 6
61 432.04 temperature 30 14400 < th dose independent rect. 20 18
69 432.08 temperature 30 14400 > th dose dependent rect. 12 1
95 433.10 temperature 30 14400 > th dose independent rect. 13 1
100 433.31 temperature 30 14400 < th dose independent sin 7 NA
140 433.64 temperature 30 14400 > th dose independent rect. 8 6
156 433.77 temperature 30 14400 < th dose independent rect. 9 2
168 434.06 temperature 30 14400 > th dose independent rect. 10 1
225 435.02 temperature 30 14400 > th dose independent sin 7 NA
330 435.98 temperature 25 14400 > th dose dependent rect. 6 19
420 437.01 temperature 25 14400 > th dose dependent no NA NA
429 437.09 temperature 25 14400 > th dose dependent rect. 14 23
682 440.61 temperature 25 14400 < th dose independent rect. 6 1
684 440.62 temperature 25 14400 > th dose dependent rect. 15 1
721 441.49 temperature 25 14400 > th dose independent rect. 6 1
838 442.88 temperature 30 14400 < th dose independent rect. 8 13
872 442.89 temperature 30 14400 < th dose independent rect. 3 18
897 442.91 temperature 30 14400 < th dose independent no NA NA
998 443.74 temperature 30 14400 < th dose independent rect. 12 23