Os02g0191200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os02g0191200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.78 | 0.523 | 2.94 | -0.17 | 0.075 | -0.161 | 1.25 | -1.01 | -0.102 | 13.2 | 79.87 | 29 | -- | -- |
| 127.6 | 0.526 | 2.94 | -0.119 | 0.0174 | -0.128 | 0.463 | -- | -0.0923 | 12.4 | 79.94 | 22 | -- | -- |
| 127.54 | 0.526 | 2.93 | -0.0917 | 0.0738 | -0.149 | -- | -0.371 | -0.0803 | 14.7 | 79.56 | 28 | -- | -- |
| 128.37 | 0.528 | 2.93 | -0.0964 | 0.0641 | -0.152 | -- | -- | -0.0858 | 14.8 | 79 | 18 | -- | -- |
| 127.64 | 0.526 | 2.93 | -0.107 | -- | -0.114 | -- | -0.37 | -0.0913 | -- | 79.64 | 32 | -- | -- |
| 128.71 | 0.532 | 2.94 | -0.115 | 0.09 | -- | -0.418 | -- | -0.094 | 0.636 | -- | -- | -- | -- |
| 129.44 | 0.533 | 2.93 | -0.0998 | 0.0935 | -- | -- | -- | -0.0923 | 1.41 | -- | -- | -- | -- |
| 128.48 | 0.528 | 2.93 | -0.0914 | -- | -0.116 | -- | -- | -0.088 | -- | 79.24 | 18 | -- | -- |
| 128.56 | 0.528 | 2.93 | -- | 0.0712 | -0.152 | -- | -- | -0.0734 | 15.6 | 79.06 | 18 | -- | -- |
| 129.98 | 0.533 | 2.93 | -0.0961 | -- | -- | -- | -- | -0.0903 | -- | -- | -- | -- | -- |
| 129.7 | 0.533 | 2.93 | -- | 0.0917 | -- | -- | -- | -0.0812 | 1.37 | -- | -- | -- | -- |
| 128.7 | 0.528 | 2.93 | -- | -- | -0.116 | -- | -- | -0.0778 | -- | 79.51 | 18 | -- | -- |
| 130.22 | 0.533 | 2.93 | -- | -- | -- | -- | -- | -0.0797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.13 | wind | 7.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 3 | 115.13 | wind | 7.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 5 | 115.22 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 6 | 115.23 | wind | 9.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 15 | 115.23 | wind | 9.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 113 | 118.75 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 120 | 118.75 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 135 | 118.87 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 137 | 118.87 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 139 | 118.90 | humidity | 80.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 193 | 120.50 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 194 | 120.65 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 290 | 121.08 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 10 |
| 303 | 121.27 | wind | 7.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 304 | 121.28 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 310 | 121.32 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 316 | 121.44 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 2 |
| 395 | 121.57 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 399 | 121.68 | wind | 7.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 408 | 121.71 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 409 | 121.72 | humidity | 80.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 432 | 121.87 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 435 | 121.88 | wind | 7.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 444 | 121.94 | radiation | 20.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 450 | 121.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 483 | 122.12 | wind | 7.0 | 720 | < th | dose independent | rect. | 11 | 14 |
| 490 | 122.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 499 | 122.18 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 515 | 122.26 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 562 | 122.41 | wind | 5.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 566 | 122.42 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 578 | 122.47 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 579 | 122.47 | humidity | 80.0 | 90 | > th | dose independent | rect. | 13 | 19 |
| 582 | 122.48 | wind | 5.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 584 | 122.48 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 20 |
| 604 | 122.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 23 |
| 605 | 122.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 23 |
| 668 | 122.69 | wind | 7.0 | 720 | > th | dose independent | sin | 15 | NA |
| 669 | 122.69 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 674 | 122.69 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 676 | 122.69 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 680 | 122.70 | wind | 7.0 | 720 | < th | dose independent | sin | 15 | NA |
| 691 | 122.72 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 704 | 122.76 | wind | 1.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 719 | 122.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 15 |
| 793 | 122.91 | humidity | 80.0 | 30 | < th | dose independent | rect. | 18 | 23 |
| 798 | 122.92 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 819 | 122.95 | wind | 7.0 | 720 | < th | dose independent | rect. | 20 | 21 |
| 851 | 122.99 | wind | 7.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 860 | 123.00 | humidity | 70.0 | 10 | > th | dose independent | rect. | 13 | 20 |
| 865 | 123.00 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 877 | 123.01 | radiation | 40.0 | 30 | < th | dose independent | rect. | 7 | 2 |
| 899 | 123.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 1 |
| 905 | 123.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 907 | 123.04 | wind | 9.0 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 911 | 123.05 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 22 |
| 916 | 123.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 918 | 123.06 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 919 | 123.06 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 921 | 123.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 922 | 123.06 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 923 | 123.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 926 | 123.06 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 929 | 123.06 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 931 | 123.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 943 | 123.07 | radiation | 10.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 974 | 123.10 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 998 | 123.11 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 11 |