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Os02g0190300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ABC transporter related domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.93 (0.0319) R2 : 0.484
β1 : 1.27 (0.117) R2dD : 0.139 R2D : 0.076
β2 : 1.4 (0.083) R2dC : 0.324 R2C : 0.284
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.555 (0.0682) R2dN8 : 0.101 R2N8 : 0.029
σ : 0.601
deviance : 164.53
__
_____
C
peak time of C : 17.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
142.94 0.562 7.9 1.1 1.71 0.425 1.59 2.43 0.594 16.7 80.6 83 -- --
159.11 0.587 7.92 1.2 1.7 0.462 0.0823 -- 0.603 16.8 79.68 59 -- --
147.73 0.566 7.91 1.15 1.7 0.409 -- 1.75 0.612 16.7 80.31 76 -- --
158.78 0.587 7.92 1.23 1.68 0.45 -- -- 0.628 16.8 82.36 91 -- --
196.95 0.654 7.92 1.11 -- -1.71 -- 2.45 0.479 -- 31.96 370 -- --
164.5 0.601 7.93 1.27 1.4 -- 0.121 -- 0.554 17.1 -- -- -- --
164.53 0.601 7.93 1.27 1.4 -- -- -- 0.555 17.1 -- -- -- --
201.5 0.661 7.93 1.26 -- -1.33 -- -- 0.447 -- 63.54 395 -- --
198.38 0.656 7.93 -- 1.74 0.558 -- -- 0.538 16.8 82.53 95 -- --
267.5 0.764 7.92 1.22 -- -- -- -- 0.519 -- -- -- -- --
207.09 0.673 7.96 -- 1.38 -- -- -- 0.413 17.2 -- -- -- --
242.78 0.726 7.96 -- -- -1.43 -- -- 0.342 -- 57.12 401 -- --
306.82 0.818 7.95 -- -- -- -- -- 0.384 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 134.61 humidity 90.0 90 < th dose independent rect. 20 17
4 135.08 humidity 50.0 270 > th dose dependent rect. 21 10
10 135.73 humidity 80.0 90 > th dose dependent rect. 22 19
15 136.16 humidity 90.0 90 < th dose independent rect. 23 14
17 136.21 precipitation 0.1 1440 < th dose independent rect. 9 4
18 136.21 precipitation 0.1 1440 < th dose dependent rect. 9 4
25 136.51 humidity 60.0 90 > th dose dependent rect. 23 10
63 137.98 humidity 90.0 90 > th dose independent rect. 23 17
81 138.77 humidity 80.0 90 > th dose dependent rect. 22 14
122 139.61 humidity 80.0 270 > th dose independent rect. 21 10
142 139.80 humidity 90.0 90 < th dose independent sin 7 NA
155 140.04 temperature 15.0 1440 > th dose independent rect. 10 4
156 140.04 humidity 90.0 90 > th dose independent rect. 23 13
161 140.08 humidity 70.0 90 > th dose dependent sin 8 NA
162 140.11 temperature 15.0 90 > th dose dependent rect. 8 5
172 140.28 wind 1.0 90 > th dose independent rect. 19 18
179 140.38 atmosphere 1015.0 270 < th dose independent rect. 7 14
181 140.39 temperature 15.0 270 > th dose independent rect. 10 23
194 140.51 temperature 15.0 270 > th dose independent rect. 11 20
197 140.57 atmosphere 1015.0 270 < th dose independent rect. 16 10
233 140.84 atmosphere 1015.0 270 < th dose independent rect. 17 19
235 140.87 atmosphere 1015.0 270 < th dose independent rect. 18 17
251 141.09 wind 9.0 270 < th dose dependent rect. 21 10
259 141.14 temperature 15.0 270 > th dose dependent rect. 9 1
265 141.18 wind 1.0 270 > th dose independent rect. 7 4
273 141.26 wind 9.0 270 < th dose dependent rect. 11 20
276 141.28 humidity 50.0 270 > th dose independent rect. 7 4
287 141.33 atmosphere 1015.0 90 < th dose independent rect. 20 17
340 141.55 atmosphere 995.0 270 > th dose independent rect. 11 20
354 141.65 wind 9.0 270 < th dose independent rect. 11 20
355 141.66 precipitation 0.1 270 < th dose independent rect. 7 4
356 141.66 precipitation 0.1 270 < th dose dependent rect. 7 4
357 141.66 wind 9.0 90 < th dose dependent rect. 13 20
366 141.74 temperature 10.0 270 > th dose independent rect. 7 4
367 141.74 atmosphere 995.0 270 > th dose independent rect. 7 4
368 141.74 atmosphere 1015.0 270 < th dose independent rect. 7 4
372 141.78 temperature 10.0 43200 > th dose independent rect. 9 5
382 141.85 radiation 40.0 10 < th dose independent rect. 13 20
391 141.90 atmosphere 995.0 90 > th dose dependent rect. 13 18
397 141.93 wind 1.0 90 > th dose independent rect. 7 6
407 141.97 wind 9.0 270 < th dose independent rect. 7 4
417 142.04 radiation 1.0 270 > th dose independent rect. 7 4
420 142.05 wind 9.0 90 < th dose dependent rect. 23 10
423 142.06 atmosphere 1015.0 10 < th dose independent rect. 20 17
431 142.11 temperature 15.0 270 > th dose independent rect. 2 14
434 142.13 precipitation 0.1 270 < th dose independent rect. 11 20
435 142.13 precipitation 0.1 270 < th dose dependent rect. 11 20
458 142.28 humidity 90.0 90 > th dose independent rect. 23 10
460 142.28 humidity 50.0 10 > th dose dependent rect. 13 20
478 142.40 radiation 1.0 90 > th dose independent rect. 7 6
479 142.40 wind 1.0 90 > th dose independent rect. 24 13
489 142.45 humidity 90.0 90 > th dose independent sin 7 NA
503 142.49 humidity 90.0 90 < th dose independent rect. 8 22
507 142.52 temperature 15.0 270 > th dose independent rect. 7 14
514 142.55 temperature 15.0 270 > th dose independent rect. 21 10
526 142.61 wind 9.0 90 < th dose independent rect. 13 18
534 142.64 humidity 90.0 90 < th dose independent rect. 7 6
540 142.69 precipitation 0.1 90 < th dose independent rect. 7 6
542 142.69 precipitation 0.1 90 < th dose dependent rect. 7 6
545 142.70 wind 1.0 270 > th dose independent rect. 16 10
547 142.71 precipitation 0.1 90 < th dose independent rect. 13 18
548 142.71 precipitation 0.1 90 < th dose dependent rect. 13 18
549 142.71 humidity 80.0 90 > th dose dependent rect. 17 23
550 142.72 temperature 10.0 90 > th dose independent rect. 7 6
551 142.72 atmosphere 995.0 90 > th dose independent rect. 7 6
552 142.72 atmosphere 1015.0 90 < th dose independent rect. 7 6
591 142.84 wind 9.0 270 < th dose independent rect. 10 23
594 142.84 humidity 80.0 90 > th dose dependent rect. 3 23
599 142.86 humidity 50.0 270 > th dose independent rect. 9 1
610 142.87 humidity 80.0 90 > th dose dependent rect. 10 23
619 142.90 atmosphere 995.0 270 > th dose independent rect. 12 18
643 143.05 humidity 80.0 90 > th dose dependent rect. 13 23
649 143.07 humidity 80.0 90 > th dose dependent no NA NA
663 143.12 precipitation 0.1 270 < th dose independent rect. 9 1
667 143.12 precipitation 0.1 270 < th dose dependent rect. 9 1
676 143.15 atmosphere 995.0 10 > th dose dependent rect. 13 20
691 143.19 temperature 10.0 270 > th dose independent rect. 9 1
692 143.19 atmosphere 995.0 270 > th dose independent rect. 9 1
693 143.19 atmosphere 1015.0 270 < th dose independent rect. 9 1
705 143.21 temperature 20.0 270 > th dose independent rect. 9 1
716 143.24 wind 9.0 270 < th dose independent rect. 9 1
720 143.25 atmosphere 995.0 270 > th dose dependent rect. 11 20
744 143.31 humidity 90.0 10 < th dose independent rect. 9 5
769 143.38 wind 1.0 270 > th dose independent rect. 17 19
787 143.42 radiation 1.0 270 > th dose independent rect. 9 1
808 143.46 humidity 80.0 90 > th dose dependent rect. 1 23
814 143.50 humidity 90.0 90 < th dose independent rect. 15 23
859 143.66 humidity 50.0 90 > th dose independent rect. 13 18
876 143.70 temperature 10.0 90 > th dose dependent rect. 20 17
884 143.72 temperature 30.0 270 < th dose independent rect. 21 10
885 143.72 humidity 50.0 270 > th dose independent rect. 21 10
887 143.72 atmosphere 995.0 270 > th dose independent rect. 21 10
888 143.72 radiation 40.0 270 < th dose independent rect. 21 10
889 143.72 wind 9.0 270 < th dose independent rect. 2 14
913 143.78 atmosphere 1015.0 90 < th dose independent rect. 9 14
915 143.79 wind 9.0 270 < th dose independent rect. 21 10
966 143.91 temperature 15.0 10 > th dose independent rect. 13 20
999 144.00 humidity 90.0 90 < th dose dependent sin 8 NA