Os02g0190200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0190200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.95 | 0.257 | 9.88 | 0.499 | 0.128 | -0.213 | -0.203 | 1.87 | 0.336 | 23.1 | 0.6028 | 6874 | -- | -- |
| 30.36 | 0.257 | 9.92 | 0.292 | 0.139 | 0.294 | -0.178 | -- | 0.346 | 23.4 | 0.8904 | 20515 | -- | -- |
| 30.09 | 0.256 | 9.87 | 0.524 | 0.125 | -0.247 | -- | 1.97 | 0.336 | 23.7 | 0.7026 | 6784 | -- | -- |
| 30.49 | 0.257 | 9.92 | 0.287 | 0.135 | 0.305 | -- | -- | 0.349 | 0.0133 | 0.7951 | 20479 | -- | -- |
| 31.13 | 0.26 | 9.86 | 0.567 | -- | -0.359 | -- | 2.46 | 0.341 | -- | 0.7365 | 6764 | -- | -- |
| 32.43 | 0.267 | 9.93 | 0.431 | 0.129 | -- | -0.2 | -- | 0.318 | 23.2 | -- | -- | -- | -- |
| 32.57 | 0.267 | 9.93 | 0.439 | 0.131 | -- | -- | -- | 0.318 | 23.8 | -- | -- | -- | -- |
| 31.6 | 0.262 | 9.92 | 0.291 | -- | 0.302 | -- | -- | 0.35 | -- | 0.8055 | 20479 | -- | -- |
| 32.16 | 0.264 | 9.92 | -- | 0.134 | 0.418 | -- | -- | 0.339 | 0.0547 | 0.854 | 23478 | -- | -- |
| 33.66 | 0.271 | 9.93 | 0.443 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 37.65 | 0.287 | 9.94 | -- | 0.137 | -- | -- | -- | 0.269 | 0.0253 | -- | -- | -- | -- |
| 33.29 | 0.269 | 9.92 | -- | -- | 0.419 | -- | -- | 0.342 | -- | 0.8642 | 23424 | -- | -- |
| 38.83 | 0.291 | 9.94 | -- | -- | -- | -- | -- | 0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 2 | 29.65 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 8 | 29.76 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 8 | 15 |
| 28 | 29.93 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 9 | 11 |
| 30 | 29.93 | temperature | 25 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 31 | 29.93 | temperature | 25 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 33 | 29.94 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 39 | 29.96 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 9 | 17 |
| 49 | 29.99 | temperature | 25 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 57 | 30.01 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 74 | 30.03 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 78 | 30.03 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 85 | 30.03 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 10 | 10 |
| 87 | 30.04 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 9 | 19 |
| 89 | 30.04 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 112 | 30.06 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 131 | 30.07 | atmosphere | 1005 | 270 | > th | dose independent | sin | 21 | NA |
| 161 | 30.08 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 8 | 5 |
| 201 | 30.09 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 206 | 30.09 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 12 | NA |
| 256 | 30.10 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 7 |
| 259 | 30.10 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 10 | NA |
| 262 | 30.10 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 284 | 30.10 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 13 | 9 |
| 325 | 30.11 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 11 | NA |
| 329 | 30.11 | wind | 5 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 390 | 30.12 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 9 | 14 |
| 398 | 30.12 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 461 | 30.13 | atmosphere | 1005 | 270 | < th | dose independent | sin | 21 | NA |
| 462 | 30.13 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 468 | 30.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 469 | 30.13 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 549 | 30.14 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 7 | 10 |
| 636 | 30.15 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 9 | 10 |
| 640 | 30.15 | atmosphere | 995 | 43200 | > th | dose dependent | no | NA | NA |
| 643 | 30.15 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 704 | 30.15 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 734 | 30.15 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 1 | 22 |
| 774 | 30.16 | atmosphere | 1015 | 43200 | < th | dose dependent | no | NA | NA |
| 845 | 30.16 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 883 | 30.17 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 963 | 30.17 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 4 | 19 |