Os02g0190000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os02g0190000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105 | 0.481 | 2.97 | -0.275 | 0.183 | 0.235 | -0.387 | -0.587 | -0.225 | 7.24 | 1006 | 1746 | -- | -- |
| 105.82 | 0.479 | 2.98 | -0.275 | 0.186 | 0.229 | -0.343 | -- | -0.246 | 7.18 | 1007 | 1614 | -- | -- |
| 105.35 | 0.478 | 2.97 | -0.273 | 0.185 | 0.234 | -- | -0.519 | -0.231 | 7.44 | 1006 | 1722 | -- | -- |
| 106.08 | 0.48 | 2.98 | -0.287 | 0.187 | 0.223 | -- | -- | -0.24 | 7.4 | 1007 | 1483 | -- | -- |
| 107.13 | 0.482 | 2.97 | -0.272 | -- | 0.226 | -- | -0.488 | -0.222 | -- | 1006 | 1727 | -- | -- |
| 108.38 | 0.488 | 2.95 | -0.308 | 0.17 | -- | -0.294 | -- | -0.115 | 7.64 | -- | -- | -- | -- |
| 108.62 | 0.488 | 2.95 | -0.315 | 0.169 | -- | -- | -- | -0.114 | 7.76 | -- | -- | -- | -- |
| 107.55 | 0.485 | 2.98 | -0.304 | -- | 0.173 | -- | -- | -0.207 | -- | 1006 | 1727 | -- | -- |
| 108.21 | 0.484 | 2.98 | -- | 0.182 | 0.247 | -- | -- | -0.222 | 7.44 | 1007 | 1626 | -- | -- |
| 110.18 | 0.49 | 2.96 | -0.313 | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
| 111.23 | 0.493 | 2.95 | -- | 0.167 | -- | -- | -- | -0.0793 | 7.89 | -- | -- | -- | -- |
| 109.83 | 0.488 | 2.99 | -- | -- | 0.244 | -- | -- | -0.234 | -- | 1008 | 1616 | -- | -- |
| 112.75 | 0.496 | 2.95 | -- | -- | -- | -- | -- | -0.0772 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 10 | 2 |
| 2 | 102.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 6 |
| 12 | 103.30 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 11 | 5 |
| 15 | 103.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 19 |
| 16 | 103.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 18 | 103.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 20 | 103.55 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 23 | 103.59 | atmosphere | 1005.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 28 | 103.70 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 3 |
| 30 | 103.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 31 | 103.72 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 3 |
| 39 | 103.82 | radiation | 20.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 45 | 103.91 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 49 | 103.96 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 10 | 6 |
| 56 | 104.02 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 11 | 5 |
| 60 | 104.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 64 | 104.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 13 |
| 88 | 104.19 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 90 | 104.19 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 92 | 104.19 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 10 | 9 |
| 95 | 104.20 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 119 | 104.29 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 120 | 104.30 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 11 | 3 |
| 135 | 104.35 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 138 | 104.35 | wind | 5.0 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 189 | 104.47 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 10 | 13 |
| 191 | 104.48 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 206 | 104.51 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 230 | 104.55 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 241 | 104.56 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 243 | 104.56 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 269 | 104.61 | atmosphere | 1010.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 281 | 104.62 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 10 | 20 |
| 285 | 104.63 | atmosphere | 1010.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 294 | 104.64 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 10 | 18 |
| 302 | 104.66 | wind | 5.0 | 30 | > th | dose independent | rect. | 11 | 3 |
| 314 | 104.67 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 2 | 14 |
| 361 | 104.73 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 18 | 22 |
| 372 | 104.75 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 21 |
| 373 | 104.75 | temperature | 30.0 | 90 | < th | dose dependent | sin | 20 | NA |
| 384 | 104.76 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 423 | 104.81 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 10 | 23 |
| 433 | 104.83 | temperature | 25.0 | 10 | < th | dose independent | rect. | 11 | 6 |
| 440 | 104.83 | atmosphere | 1010.0 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 501 | 104.88 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 14 |
| 503 | 104.89 | atmosphere | 1005.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 516 | 104.89 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 5 | 13 |
| 617 | 104.96 | atmosphere | 1005.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 627 | 104.97 | wind | 1.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 636 | 104.98 | atmosphere | 1005.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 637 | 104.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 644 | 104.98 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 672 | 105.00 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 10 | 18 |
| 684 | 105.00 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 728 | 105.03 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 767 | 105.05 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 789 | 105.06 | atmosphere | 1005.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 803 | 105.07 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 810 | 105.07 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 822 | 105.07 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 823 | 105.07 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 876 | 105.10 | temperature | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 882 | 105.10 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 14 |
| 887 | 105.10 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 889 | 105.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 905 | 105.11 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 915 | 105.12 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 924 | 105.12 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 2 | 10 |
| 926 | 105.12 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 13 |
| 952 | 105.13 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 956 | 105.14 | wind | 5.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 958 | 105.14 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 10 | 13 |
| 964 | 105.14 | atmosphere | 1010.0 | 1440 | < th | dose dependent | sin | 3 | NA |