Os02g0189900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hepatocellular carcinoma-associated antigen 59 family protein.
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Os02g0189900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hepatocellular carcinoma-associated antigen 59 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.68 | 0.395 | 7.45 | 1 | 0.95 | 1.31 | 0.223 | -2.53 | 0.183 | 4.32 | 29.4 | 59 | -- | -- |
| 78.17 | 0.415 | 7.5 | 0.56 | 0.946 | 1.32 | -0.584 | -- | 0.0609 | 4.49 | 29.4 | 59 | -- | -- |
| 70.79 | 0.392 | 7.45 | 0.987 | 0.947 | 1.32 | -- | -2.4 | 0.181 | 4.33 | 29.4 | 58 | -- | -- |
| 78.59 | 0.413 | 7.5 | 0.582 | 0.927 | 1.34 | -- | -- | 0.0786 | 4.35 | 28.9 | 58 | -- | -- |
| 105.27 | 0.478 | 7.43 | 1.15 | -- | 2.15 | -- | -2.17 | 0.332 | -- | 30.13 | 98 | -- | -- |
| 102.64 | 0.475 | 7.56 | 0.242 | 1.33 | -- | -0.45 | -- | -0.203 | 3.78 | -- | -- | -- | -- |
| 103.24 | 0.476 | 7.56 | 0.249 | 1.33 | -- | -- | -- | -0.2 | 3.8 | -- | -- | -- | -- |
| 111.35 | 0.491 | 7.47 | 0.815 | -- | 2.16 | -- | -- | 0.249 | -- | 29.74 | 109 | -- | -- |
| 86.62 | 0.436 | 7.52 | -- | 1.02 | 1.08 | -- | -- | -0.0376 | 4.37 | 29.02 | 58 | -- | -- |
| 200.68 | 0.662 | 7.56 | 0.304 | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
| 104.88 | 0.479 | 7.57 | -- | 1.33 | -- | -- | -- | -0.228 | 3.8 | -- | -- | -- | -- |
| 127.31 | 0.526 | 7.5 | -- | -- | 1.93 | -- | -- | 0.12 | -- | 29.85 | 109 | -- | -- |
| 203.12 | 0.665 | 7.57 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 5 | 66.60 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 6 | 66.61 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 9 | 66.74 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 10 | 66.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 12 | 66.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 21 | 67.14 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 23 | 67.15 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 26 | 67.21 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 29 | 67.26 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 33 | 67.31 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 34 | 67.34 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 36 | 67.38 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 54 | 67.57 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 55 | 67.58 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 59 | 67.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 65 | 67.68 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 79 | 67.82 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 80 | 67.83 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 86 | 67.88 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 114 | 68.08 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 128 | 68.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 143 | 68.18 | humidity | 80.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 167 | 68.27 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 190 | 68.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 201 | 68.38 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 219 | 68.44 | wind | 9.0 | 43200 | < th | dose dependent | sin | 19 | NA |
| 232 | 68.49 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 257 | 68.57 | wind | 1.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 336 | 68.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 357 | 68.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 358 | 68.88 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 359 | 68.88 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 378 | 68.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 380 | 68.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 456 | 69.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 459 | 69.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 462 | 69.13 | humidity | 80.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 477 | 69.16 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 598 | 69.47 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 650 | 69.58 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 677 | 69.63 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 728 | 69.72 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 738 | 69.75 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 765 | 69.79 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 777 | 69.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 870 | 69.97 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 873 | 69.98 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 909 | 70.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 913 | 70.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 914 | 70.05 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 955 | 70.11 | humidity | 50.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 974 | 70.14 | humidity | 50.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 977 | 70.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 1000 | 70.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 20 |