Os02g0189700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Felis catus multi-drug resistance related (Fragment).
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Os02g0189700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Felis catus multi-drug resistance related (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.05 | 0.579 | 4.76 | 0.0361 | 0.772 | -1.45 | 1.3 | 3.08 | 0.629 | 1.51 | 20.57 | 93 | -- | -- |
| 157.76 | 0.585 | 4.84 | -0.524 | 0.843 | -1.22 | 0.596 | -- | 0.44 | 1.14 | 21.04 | 165 | -- | -- |
| 156.13 | 0.582 | 4.79 | -0.183 | 0.806 | -1.45 | -- | 1.94 | 0.558 | 0.985 | 21 | 167 | -- | -- |
| 158.91 | 0.587 | 4.83 | -0.546 | 0.826 | -1.28 | -- | -- | 0.456 | 1.13 | 21.09 | 160 | -- | -- |
| 178.25 | 0.625 | 4.76 | -0.119 | -- | -2.11 | -- | 1.85 | 0.667 | -- | 21.96 | 51 | -- | -- |
| 183.86 | 0.636 | 4.87 | -0.81 | 1.24 | -- | 0.812 | -- | 0.249 | 2.15 | -- | -- | -- | -- |
| 186.33 | 0.639 | 4.87 | -0.833 | 1.25 | -- | -- | -- | 0.244 | 2.16 | -- | -- | -- | -- |
| 180.78 | 0.629 | 4.8 | -0.452 | -- | -1.98 | -- | -- | 0.54 | -- | 23.16 | 19 | -- | -- |
| 166.34 | 0.601 | 4.81 | -- | 0.768 | -1.46 | -- | -- | 0.544 | 0.864 | 20.88 | 163 | -- | -- |
| 279.01 | 0.781 | 4.86 | -0.781 | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
| 204.64 | 0.669 | 4.85 | -- | 1.23 | -- | -- | -- | 0.337 | 2.15 | -- | -- | -- | -- |
| 185.19 | 0.634 | 4.78 | -- | -- | -2.07 | -- | -- | 0.628 | -- | 22.47 | 12 | -- | -- |
| 295.1 | 0.802 | 4.84 | -- | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 14 |
| 2 | 144.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 3 | 144.94 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 20 | 147.45 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 27 | 147.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 28 | 147.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 29 | 147.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 34 | 148.11 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 35 | 148.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 39 | 148.13 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 17 |
| 40 | 148.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 55 | 148.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 57 | 148.43 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 66 | 148.50 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 22 |
| 75 | 148.58 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 83 | 148.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 12 |
| 92 | 148.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 107 | 148.81 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 146 | 148.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 169 | 149.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 170 | 149.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 206 | 149.13 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 211 | 149.16 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 230 | 149.22 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 238 | 149.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 372 | 150.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 382 | 150.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 388 | 150.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 390 | 150.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 395 | 150.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 410 | 150.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 413 | 150.43 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 18 |
| 430 | 150.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 445 | 150.60 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 447 | 150.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 479 | 150.77 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 521 | 150.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 556 | 151.08 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 565 | 151.12 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 567 | 151.13 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 19 |
| 573 | 151.14 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 588 | 151.19 | humidity | 90 | 14400 | > th | dose independent | sin | 13 | NA |
| 602 | 151.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 610 | 151.24 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 619 | 151.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 621 | 151.26 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 669 | 151.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 688 | 151.37 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 719 | 151.42 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 727 | 151.44 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 730 | 151.44 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 761 | 151.50 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 793 | 151.56 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 807 | 151.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 7 |
| 811 | 151.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 837 | 151.64 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 838 | 151.64 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 893 | 151.74 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 21 |
| 901 | 151.75 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 935 | 151.83 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 950 | 151.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 952 | 151.87 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 962 | 151.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 973 | 151.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 20 |