Os02g0189200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0189200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.89 | 0.535 | 2.92 | -0.289 | 0.171 | 0.0735 | -0.56 | 1.03 | 0.043 | 5.4 | 22.9 | 273 | -- | -- |
| 132.92 | 0.537 | 2.88 | 0.0657 | 0.00422 | 0.224 | -0.386 | -- | 0.17 | 5.72 | 26.5 | 260 | -- | -- |
| 130.5 | 0.532 | 2.91 | -0.239 | 0.167 | 0.0759 | -- | 0.898 | 0.056 | 5.52 | 22.84 | 229 | -- | -- |
| 132.99 | 0.537 | 2.88 | 0.0997 | 0.00215 | 0.212 | -- | -- | 0.164 | 5.59 | 26.4 | 260 | -- | -- |
| 131.92 | 0.535 | 2.92 | -0.223 | -- | 0.0941 | -- | 0.89 | 0.0595 | -- | 22.9 | 231 | -- | -- |
| 134.82 | 0.544 | 2.89 | 0.0419 | 0.169 | -- | -0.146 | -- | 0.107 | 5.44 | -- | -- | -- | -- |
| 134.87 | 0.544 | 2.89 | 0.0411 | 0.168 | -- | -- | -- | 0.107 | 5.13 | -- | -- | -- | -- |
| 132.96 | 0.537 | 2.88 | 0.103 | -- | 0.222 | -- | -- | 0.174 | -- | 26.36 | 330 | -- | -- |
| 133.24 | 0.538 | 2.88 | -- | 0.017 | 0.194 | -- | -- | 0.149 | 7.18 | 26.5 | 261 | -- | -- |
| 136.34 | 0.546 | 2.89 | 0.047 | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
| 134.91 | 0.543 | 2.89 | -- | 0.169 | -- | -- | -- | 0.103 | 5.13 | -- | -- | -- | -- |
| 133.24 | 0.538 | 2.88 | -- | -- | 0.212 | -- | -- | 0.158 | -- | 26.4 | 326 | -- | -- |
| 136.4 | 0.545 | 2.89 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.44 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 4 | 117.47 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 7 |
| 7 | 118.35 | wind | 3.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 8 | 118.54 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 9 | 118.56 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 13 | 118.60 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 18 | 118.62 | wind | 5.0 | 30 | > th | dose independent | rect. | 4 | 2 |
| 24 | 118.64 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 25 | 118.64 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 74 | 118.72 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 79 | 118.72 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 181 | 121.56 | precipitation | 0.1 | 90 | > th | dose independent | sin | 4 | NA |
| 185 | 121.89 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 187 | 122.00 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 12 |
| 190 | 122.04 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 198 | 122.08 | precipitation | 0.1 | 90 | < th | dose independent | sin | 4 | NA |
| 201 | 122.08 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 4 | NA |
| 217 | 122.42 | wind | 7.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 219 | 122.47 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 16 |
| 246 | 122.74 | wind | 7.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 256 | 122.86 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 5 | NA |
| 302 | 123.69 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 308 | 123.80 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 309 | 123.88 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 18 |
| 312 | 123.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 331 | 124.15 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 8 |
| 339 | 124.18 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 394 | 124.64 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 5 |
| 559 | 126.05 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 561 | 126.07 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 572 | 126.15 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 573 | 126.15 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 811 | 127.61 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 812 | 127.61 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 888 | 127.82 | wind | 7.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 921 | 128.17 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 997 | 128.73 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |