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Os02g0188000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0283) R2 : 0.597
β1 : 1.92 (0.108) R2dD : 0.33 R2D : 0.242
β2 : 0.983 (0.0812) R2dC : 0.164 R2C : 0.268
β3 : 1.17 (0.141) R2dE : 0.0971 R2E : 0.101
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.153 (0.0664) R2dN8 : 0.00801 R2N8 : -0.0274
σ : 0.518
deviance : 123.63
__
_____
C
peak time of C : 6.22
E
wheather : temperature
threshold : 28.6
memory length : 408
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.2 0.506 12.7 2.27 1 1.11 1.59 -2.1 0.245 6.83 28.78 272 -- --
120.81 0.512 12.7 1.94 0.983 1.19 1.11 -- 0.176 6.74 28.4 341 -- --
121.95 0.514 12.7 2.17 1.01 1.11 -- -1.4 0.212 6.7 28.52 252 -- --
123.63 0.518 12.7 1.92 0.983 1.17 -- -- 0.153 6.22 28.6 408 -- --
157.46 0.584 12.7 2.38 -- 2.19 -- -1.66 0.3 -- 34.5 388 -- --
139.89 0.554 12.8 1.61 1.28 -- 1.08 -- -0.0951 6.31 -- -- -- --
142.6 0.559 12.8 1.62 1.29 -- -- -- -0.0996 6.16 -- -- -- --
159.13 0.588 12.7 2.13 -- 2.07 -- -- 0.274 -- 31.64 391 -- --
211.04 0.677 12.8 -- 1.18 0.47 -- -- -0.14 5.96 28.36 463 -- --
228.8 0.707 12.8 1.66 -- -- -- -- -0.071 -- -- -- -- --
211.95 0.681 12.8 -- 1.31 -- -- -- -0.28 6.1 -- -- -- --
268.27 0.763 12.8 -- -- 1.43 -- -- -0.0896 -- 36.21 379 -- --
301.32 0.81 12.9 -- -- -- -- -- -0.255 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.19 humidity 80.0 14400 > th dose dependent rect. 22 8
2 111.23 humidity 80.0 14400 > th dose dependent rect. 22 6
6 111.76 humidity 90.0 14400 < th dose independent rect. 22 3
10 112.08 humidity 90.0 14400 > th dose dependent rect. 23 2
11 112.18 humidity 90.0 14400 > th dose independent rect. 22 5
12 112.18 humidity 90.0 14400 < th dose independent rect. 22 5
15 112.32 humidity 90.0 43200 < th dose independent rect. 6 1
16 112.37 humidity 90.0 43200 < th dose independent rect. 5 3
20 112.44 humidity 90.0 14400 < th dose independent rect. 21 8
23 112.52 humidity 90.0 14400 > th dose dependent rect. 5 2
37 112.75 humidity 90.0 43200 > th dose independent rect. 6 1
38 112.75 radiation 30.0 14400 > th dose independent rect. 7 1
60 112.95 radiation 30.0 14400 > th dose dependent rect. 7 1
75 113.00 radiation 40.0 14400 < th dose independent rect. 1 7
76 113.02 radiation 40.0 14400 < th dose independent rect. 3 5
96 113.16 humidity 90.0 14400 > th dose independent rect. 22 9
101 113.24 humidity 50.0 14400 > th dose dependent rect. 22 6
108 113.29 radiation 40.0 14400 < th dose independent rect. 7 1
111 113.30 radiation 40.0 14400 < th dose independent rect. 17 15
114 113.32 humidity 80.0 43200 > th dose dependent rect. 5 6
125 113.44 radiation 40.0 14400 < th dose independent rect. 23 9
135 113.52 temperature 20.0 1440 < th dose independent rect. 5 1
138 113.55 temperature 20.0 270 > th dose independent rect. 21 22
151 113.66 wind 9.0 43200 > th dose dependent rect. 22 3
175 113.86 wind 9.0 43200 > th dose dependent rect. 22 5
183 113.91 temperature 20.0 90 > th dose independent rect. 11 23
186 113.93 wind 7.0 43200 > th dose independent rect. 5 4
193 113.95 radiation 1.0 4320 < th dose dependent rect. 20 13
194 113.97 wind 7.0 43200 > th dose independent rect. 9 1
195 113.97 wind 7.0 43200 > th dose independent rect. 6 2
212 114.02 radiation 1.0 4320 < th dose dependent rect. 24 9
220 114.06 wind 7.0 43200 < th dose independent rect. 9 1
231 114.11 temperature 30.0 270 < th dose dependent rect. 14 21
233 114.12 wind 9.0 43200 < th dose independent rect. 18 16
237 114.13 radiation 1.0 4320 < th dose dependent rect. 4 5
249 114.19 temperature 30.0 270 < th dose dependent sin 18 NA
257 114.25 wind 7.0 43200 < th dose independent rect. 6 2
258 114.26 wind 9.0 43200 > th dose independent rect. 18 16
275 114.34 precipitation 0.1 43200 > th dose independent rect. 6 1
277 114.34 precipitation 0.1 43200 > th dose dependent rect. 6 1
291 114.37 temperature 15.0 270 > th dose dependent rect. 11 23
300 114.39 temperature 10.0 270 > th dose dependent rect. 20 23
304 114.42 precipitation 0.1 43200 < th dose independent rect. 6 1
305 114.42 precipitation 0.1 43200 < th dose dependent rect. 6 1
330 114.50 wind 7.0 43200 < th dose independent rect. 5 4
358 114.58 humidity 90.0 14400 > th dose dependent sin 8 NA
362 114.62 temperature 20.0 1440 > th dose independent rect. 5 2
410 114.80 temperature 15.0 43200 < th dose independent rect. 3 1
416 114.80 wind 9.0 43200 > th dose dependent rect. 18 14
429 114.84 temperature 15.0 43200 > th dose independent rect. 5 2
436 114.85 humidity 80.0 43200 > th dose dependent rect. 8 2
453 114.92 temperature 15.0 43200 < th dose independent rect. 5 1
498 115.05 radiation 1.0 4320 < th dose dependent sin 8 NA
502 115.07 temperature 15.0 43200 < th dose independent rect. 3 3
504 115.07 temperature 15.0 43200 < th dose dependent rect. 3 1
515 115.12 wind 9.0 43200 > th dose independent rect. 18 7
544 115.20 temperature 20.0 270 < th dose independent rect. 15 18
555 115.22 wind 9.0 43200 > th dose dependent rect. 19 6
576 115.27 atmosphere 1015.0 43200 > th dose dependent rect. 20 1
600 115.32 atmosphere 1015.0 43200 > th dose dependent rect. 14 8
617 115.35 wind 7.0 43200 > th dose independent rect. 5 7
619 115.35 temperature 20.0 270 > th dose independent rect. 13 14
624 115.36 atmosphere 1015.0 43200 > th dose independent rect. 19 1
629 115.37 wind 9.0 43200 < th dose independent rect. 18 6
651 115.41 atmosphere 1015.0 43200 < th dose independent rect. 17 3
652 115.41 wind 7.0 43200 > th dose dependent rect. 9 1
659 115.42 wind 7.0 43200 > th dose dependent rect. 18 16
676 115.47 humidity 90.0 43200 < th dose independent sin 2 NA
677 115.47 wind 7.0 43200 > th dose independent rect. 23 2
717 115.53 atmosphere 1015.0 43200 > th dose dependent rect. 13 5
771 115.61 precipitation 0.1 43200 < th dose independent rect. 3 5
776 115.61 atmosphere 1015.0 43200 > th dose dependent rect. 14 1
778 115.61 precipitation 0.1 43200 < th dose dependent rect. 3 5
789 115.62 wind 7.0 43200 > th dose dependent rect. 18 21
817 115.65 humidity 90.0 14400 < th dose independent sin 10 NA
819 115.65 precipitation 0.1 43200 > th dose independent rect. 3 5
828 115.66 humidity 90.0 43200 > th dose independent sin 2 NA
839 115.66 temperature 30.0 270 < th dose dependent rect. 10 14
874 115.71 temperature 20.0 1440 < th dose dependent rect. 2 3
944 115.79 wind 7.0 43200 > th dose dependent rect. 7 8
966 115.81 wind 7.0 43200 > th dose dependent rect. 5 10
996 115.85 atmosphere 1015.0 43200 > th dose independent rect. 14 6