Os02g0187700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1).
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Os02g0187700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278 | 0.783 | 3.9 | -1.04 | 1.3 | -1.94 | 0.0215 | -2.1 | -0.164 | 19 | 79.46 | 1453 | 10.9 | 2.16 |
| 286.22 | 0.788 | 3.88 | -0.851 | 1.3 | -1.73 | 0.139 | -- | -0.125 | 19.1 | 79.13 | 1453 | 10.9 | 2.28 |
| 277.95 | 0.776 | 3.9 | -1.04 | 1.3 | -1.96 | -- | -2.13 | -0.164 | 19 | 79.47 | 1455 | 10.9 | 2.17 |
| 286.2 | 0.788 | 3.88 | -0.859 | 1.3 | -1.73 | -- | -- | -0.124 | 19 | 79.19 | 1453 | 10.9 | 2.33 |
| 366.3 | 0.891 | 3.9 | -1.08 | -- | -2.07 | -- | -2.25 | -0.213 | -- | 79.31 | 1466 | 10.8 | 2.27 |
| 350.34 | 0.877 | 3.93 | -1.09 | 1.34 | -- | 0.0425 | -- | -0.36 | 19.2 | -- | -- | -- | -- |
| 350.35 | 0.877 | 3.93 | -1.09 | 1.34 | -- | -- | -- | -0.36 | 19.2 | -- | -- | -- | -- |
| 374.38 | 0.901 | 3.85 | -0.885 | -- | -1.86 | -- | -- | -0.157 | -- | 79.08 | 1466 | 10.8 | 2.4 |
| 304.47 | 0.813 | 3.87 | -- | 1.33 | -1.87 | -- | -- | -0.0334 | 19 | 79.5 | 1451 | 10.9 | 2.16 |
| 445.21 | 0.986 | 3.9 | -1.11 | -- | -- | -- | -- | -0.384 | -- | -- | -- | -- | -- |
| 381.54 | 0.914 | 3.9 | -- | 1.35 | -- | -- | -- | -0.239 | 19.1 | -- | -- | -- | -- |
| 394.28 | 0.925 | 3.83 | -- | -- | -1.91 | -- | -- | -0.0376 | -- | 79 | 1462 | 10.7 | 2.42 |
| 477.86 | 1.02 | 3.87 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 281.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 284.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 3 | 286.14 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 7 | 287.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 28 | 292.55 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 47 | 294.20 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 60 | 295.11 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 61 | 295.14 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 66 | 295.26 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 86 | 296.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 87 | 296.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 88 | 296.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 89 | 296.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 6 |
| 105 | 296.70 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 106 | 296.70 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 107 | 296.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 108 | 296.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 109 | 296.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 127 | 297.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 6 |
| 139 | 297.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 143 | 297.64 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 12 |
| 156 | 298.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 164 | 298.23 | precipitation | 0.1 | 720 | < th | dose independent | sin | 2 | NA |
| 165 | 298.23 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 2 | NA |
| 176 | 298.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 177 | 298.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 184 | 298.80 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 11 |
| 193 | 298.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 195 | 298.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 210 | 299.36 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 214 | 299.44 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 12 |
| 267 | 300.74 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 306 | 301.80 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 312 | 301.98 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 317 | 302.04 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 318 | 302.04 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 341 | 302.63 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 389 | 303.43 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 391 | 303.45 | precipitation | 0.1 | 720 | > th | dose independent | sin | 2 | NA |
| 401 | 303.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 404 | 303.57 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 436 | 303.92 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 18 |
| 527 | 304.91 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 554 | 305.23 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 20 |
| 568 | 305.31 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 571 | 305.32 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 3 | NA |
| 594 | 305.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 623 | 305.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 656 | 305.91 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 677 | 306.06 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 713 | 306.29 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 726 | 306.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 729 | 306.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 15 |
| 731 | 306.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 15 |
| 738 | 306.45 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 15 |
| 750 | 306.51 | humidity | 90.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 784 | 306.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 786 | 306.67 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 789 | 306.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 844 | 306.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 893 | 307.21 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 16 |
| 896 | 307.21 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 969 | 307.48 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 23 |