Os02g0187000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0187000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.53 | 0.654 | 8.13 | 0.642 | 0.292 | 2.53 | 0.476 | 2.27 | -0.46 | 7.42 | 24.9 | 1353 | -- | -- |
| 199 | 0.657 | 8.08 | 1.01 | 0.288 | 2.39 | 0.404 | -- | -0.343 | 7.67 | 25.3 | 1358 | -- | -- |
| 194.04 | 0.649 | 8.13 | 0.664 | 0.273 | 2.51 | -- | 2.14 | -0.456 | 6.67 | 24.9 | 1235 | -- | -- |
| 198.1 | 0.656 | 8.09 | 1.03 | 0.227 | 2.26 | -- | -- | -0.379 | 5.1 | 25.2 | 1054 | -- | -- |
| 194.35 | 0.649 | 8.13 | 0.793 | -- | 2.3 | -- | 1.91 | -0.398 | -- | 24.9 | 2199 | -- | -- |
| 270.56 | 0.771 | 8.19 | 0.346 | 0.286 | -- | 0.445 | -- | -0.861 | 8.94 | -- | -- | -- | -- |
| 271.22 | 0.771 | 8.19 | 0.362 | 0.283 | -- | -- | -- | -0.86 | 9.18 | -- | -- | -- | -- |
| 199.26 | 0.657 | 8.08 | 1.17 | -- | 2.11 | -- | -- | -0.332 | -- | 25.2 | 2185 | -- | -- |
| 221.49 | 0.693 | 8.14 | -- | 0.144 | 1.8 | -- | -- | -0.593 | 4.33 | 25 | 857 | -- | -- |
| 275.87 | 0.776 | 8.2 | 0.361 | -- | -- | -- | -- | -0.859 | -- | -- | -- | -- | -- |
| 274.68 | 0.775 | 8.2 | -- | 0.284 | -- | -- | -- | -0.9 | 9.09 | -- | -- | -- | -- |
| 222.15 | 0.694 | 8.14 | -- | -- | 1.77 | -- | -- | -0.588 | -- | 25.1 | 757 | -- | -- |
| 279.31 | 0.78 | 8.21 | -- | -- | -- | -- | -- | -0.899 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.21 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 11 | 188.65 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 24 | 188.95 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 57 | 190.02 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 67 | 190.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 132 | 192.03 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 140 | 192.13 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 172 | 192.60 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 228 | 193.31 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 271 | 193.74 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 277 | 193.81 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 301 | 193.93 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 323 | 194.08 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 779 | 196.84 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 882 | 197.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 993 | 198.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |