Os02g0186900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0186900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.45 | 0.411 | 7.09 | 0.452 | 1.07 | -0.885 | 0.171 | 0.281 | 0.887 | 0.506 | 24.46 | 555 | -- | -- |
| 76.22 | 0.407 | 7.07 | 0.508 | 1.11 | -0.991 | 0.124 | -- | 0.918 | 0.458 | 23.67 | 426 | -- | -- |
| 76.21 | 0.407 | 7.09 | 0.431 | 1.11 | -0.919 | -- | 0.355 | 0.882 | 0.496 | 24.2 | 417 | -- | -- |
| 76.26 | 0.407 | 7.08 | 0.497 | 1.12 | -0.972 | -- | -- | 0.912 | 0.487 | 23.75 | 422 | -- | -- |
| 133.24 | 0.538 | 7.11 | 0.279 | -- | -1.42 | -- | 0.862 | 0.772 | -- | 29.12 | 905 | -- | -- |
| 88.67 | 0.441 | 7.04 | 0.739 | 1.12 | -- | 0.108 | -- | 1.07 | 0.211 | -- | -- | -- | -- |
| 88.72 | 0.441 | 7.04 | 0.735 | 1.12 | -- | -- | -- | 1.07 | 0.207 | -- | -- | -- | -- |
| 132.7 | 0.537 | 7.09 | 0.342 | -- | -1.48 | -- | -- | 0.774 | -- | 28.5 | 896 | -- | -- |
| 82.02 | 0.422 | 7.1 | -- | 1.12 | -1.21 | -- | -- | 0.83 | 0.561 | 23.46 | 433 | -- | -- |
| 168.18 | 0.606 | 7.02 | 0.772 | -- | -- | -- | -- | 1.09 | -- | -- | -- | -- | -- |
| 102.97 | 0.475 | 7.06 | -- | 1.13 | -- | -- | -- | 0.992 | 0.242 | -- | -- | -- | -- |
| 135.42 | 0.542 | 7.11 | -- | -- | -1.62 | -- | -- | 0.709 | -- | 28.45 | 900 | -- | -- |
| 183.9 | 0.633 | 7.04 | -- | -- | -- | -- | -- | 1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 9 | 76.25 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 16 | 76.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 36 | 76.68 | temperature | 15 | 720 | > th | dose dependent | sin | 12 | NA |
| 86 | 76.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 109 | 77.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 9 |
| 148 | 77.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 223 | 77.36 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 260 | 77.47 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 261 | 77.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 285 | 77.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 324 | 77.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 426 | 77.94 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 472 | 78.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 18 |
| 480 | 78.08 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 488 | 78.11 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 10 | 17 |
| 543 | 78.21 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 10 | 18 |
| 560 | 78.25 | humidity | 50 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 599 | 78.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 648 | 78.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 662 | 78.49 | temperature | 20 | 270 | < th | dose dependent | sin | 22 | NA |
| 702 | 78.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 758 | 78.67 | temperature | 25 | 30 | < th | dose dependent | rect. | 16 | 21 |
| 767 | 78.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 786 | 78.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 811 | 78.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 814 | 78.75 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 22 |
| 857 | 78.79 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 871 | 78.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 874 | 78.82 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 925 | 78.88 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 9 | 4 |
| 933 | 78.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |