Os02g0186800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0186800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.08 | 0.671 | 6.06 | 2.83 | 2.3 | -0.475 | -0.0791 | -7.69 | 1.03 | 16.2 | 29.47 | 1396 | -- | -- |
| 212.54 | 0.679 | 5.83 | 4.27 | 2.4 | -1.36 | 0.84 | -- | 1.26 | 16.2 | 28.32 | 5762 | -- | -- |
| 204.03 | 0.665 | 6.05 | 2.92 | 2.29 | -0.543 | -- | -7.11 | 1.03 | 16.2 | 29.3 | 1394 | -- | -- |
| 205.56 | 0.668 | 5.82 | 4.35 | 2.32 | -1.44 | -- | -- | 1.28 | 16.3 | 27.6 | 1313 | -- | -- |
| 481.11 | 1.02 | 6.07 | 2.87 | -- | -0.871 | -- | -7.09 | 0.9 | -- | 28.82 | 1278 | -- | -- |
| 299.22 | 0.811 | 5.83 | 3.9 | 2.45 | -- | 0.26 | -- | 1.32 | 16.1 | -- | -- | -- | -- |
| 299.41 | 0.81 | 5.83 | 3.9 | 2.45 | -- | -- | -- | 1.32 | 16.1 | -- | -- | -- | -- |
| 471.75 | 1.01 | 5.76 | 4.48 | -- | -2.08 | -- | -- | 1.5 | -- | 24.4 | 1243 | -- | -- |
| 672.36 | 1.21 | 5.97 | -- | 2.34 | -0.938 | -- | -- | 0.715 | 16.2 | 31.15 | 1852 | -- | -- |
| 625.83 | 1.17 | 5.82 | 3.8 | -- | -- | -- | -- | 1.26 | -- | -- | -- | -- | -- |
| 700.72 | 1.24 | 5.93 | -- | 2.38 | -- | -- | -- | 0.886 | 16.1 | -- | -- | -- | -- |
| 938.31 | 1.43 | 5.94 | -- | -- | 1.64 | -- | -- | 0.7 | -- | 24.4 | 1243 | -- | -- |
| 1007.31 | 1.48 | 5.91 | -- | -- | -- | -- | -- | 0.833 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.10 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 2 | 200.22 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 3 | 200.51 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 20 | 201.46 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 21 | 201.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 32 | 202.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 36 | 202.82 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 38 | 202.84 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 47 | 202.97 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 49 | 203.08 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 52 | 203.16 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 57 | 203.25 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 82 | 203.68 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 87 | 203.81 | temperature | 30 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 117 | 204.37 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 154 | 204.52 | temperature | 30 | 1440 | > th | dose dependent | sin | 23 | NA |
| 240 | 204.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 263 | 204.80 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 369 | 205.05 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 371 | 205.07 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 404 | 205.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 423 | 205.47 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 433 | 205.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 493 | 205.85 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 502 | 205.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 510 | 205.98 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 537 | 205.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 549 | 206.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 563 | 206.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 564 | 206.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 566 | 206.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 570 | 206.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 579 | 206.09 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 618 | 206.23 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 619 | 206.24 | temperature | 30 | 1440 | > th | dose independent | sin | 18 | NA |
| 636 | 206.35 | temperature | 30 | 1440 | < th | dose independent | sin | 18 | NA |
| 651 | 206.44 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 680 | 206.53 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 681 | 206.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 797 | 206.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 18 |
| 812 | 206.60 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 823 | 206.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 23 |