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Os02g0186700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.96 (0.0286) R2 : 0.655
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.4 (0.0815) R2dE : 0.654 R2E : 0.654
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0774 (0.0602) R2dN8 : 0.00134 R2N8 : 0.00176
σ : 0.538
deviance : 133.3
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : -9.985
memory length : 1078
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.15
open length of G : 6.43

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
115.3 0.504 8.99 0.238 2.08 2.22 1.64 0.583 0.165 20.1 5.976 226 6.4 7.27
115.49 0.501 8.99 0.251 2.06 2.11 1.3 -- 0.177 20 4.201 217 6.4 7.4
121.61 0.514 8.99 0.208 1.97 2.16 -- 0.0874 0.162 20 3.866 203 6.62 7.56
120.59 0.511 8.99 0.235 2.08 2.12 -- -- 0.183 20.1 3.732 225 6.27 7.42
144.71 0.56 8.89 -0.169 -- 2.09 -- 1.94 0.221 -- 6.208 982 6.37 5.67
177.02 0.624 8.96 0.289 1.96 -- 1.03 -- 0.165 16.7 -- -- -- --
179.81 0.628 8.96 0.295 1.96 -- -- -- 0.17 16.6 -- -- -- --
137.19 0.546 8.93 0.101 -- 2.29 -- -- 0.137 -- 1.419 990 6.27 5.77
121.41 0.513 9.01 -- 2.14 2.23 -- -- 0.0985 20.3 2.285 241 6.02 7.65
384.8 0.917 8.94 0.219 -- -- -- -- 0.119 -- -- -- -- --
182.1 0.631 8.97 -- 1.96 -- -- -- 0.138 16.6 -- -- -- --
133.3 0.538 8.96 -- -- 2.4 -- -- 0.0774 -- -9.985 1078 5.15 6.43
386.07 0.917 8.95 -- -- -- -- -- 0.0946 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.25 temperature 10.0 270 > th dose dependent rect. 6 7
2 120.38 temperature 10.0 90 > th dose dependent rect. 8 7
4 121.41 humidity 50.0 270 > th dose independent rect. 6 8
5 121.89 temperature 10.0 90 > th dose dependent rect. 8 19
6 122.22 wind 9.0 270 < th dose independent rect. 6 8
7 122.32 precipitation 0.1 270 < th dose independent rect. 6 8
8 122.32 precipitation 0.1 270 < th dose dependent rect. 6 8
9 122.56 temperature 10.0 270 > th dose independent rect. 6 8
10 122.56 atmosphere 995.0 270 > th dose independent rect. 6 8
11 122.56 atmosphere 1015.0 270 < th dose independent rect. 6 8
12 122.56 temperature 10.0 270 > th dose independent rect. 14 16
14 123.04 temperature 10.0 10 > th dose dependent rect. 9 18
15 123.14 atmosphere 995.0 270 > th dose independent rect. 14 16
22 123.80 wind 9.0 90 < th dose independent rect. 8 19
23 123.94 wind 9.0 270 < th dose independent rect. 14 16
24 123.95 wind 5.0 90 < th dose independent rect. 3 5
25 124.14 temperature 30.0 270 < th dose dependent rect. 3 2
27 124.24 precipitation 0.1 90 < th dose independent rect. 8 7
28 124.24 precipitation 0.1 90 < th dose dependent rect. 8 7
31 124.31 precipitation 0.1 90 < th dose independent rect. 3 5
32 124.31 precipitation 0.1 90 < th dose dependent rect. 3 5
33 124.39 radiation 40.0 270 < th dose independent rect. 14 16
34 124.54 humidity 50.0 90 > th dose independent rect. 8 7
35 124.55 temperature 10.0 90 > th dose independent rect. 8 7
36 124.55 atmosphere 1015.0 90 < th dose independent rect. 8 7
39 124.61 temperature 10.0 90 > th dose independent rect. 3 5
41 124.61 temperature 30.0 90 < th dose independent rect. 3 5
42 124.61 humidity 50.0 90 > th dose independent rect. 3 5
44 124.61 atmosphere 995.0 90 > th dose independent rect. 3 5
45 124.61 atmosphere 1015.0 90 < th dose independent rect. 3 5
46 124.61 temperature 10.0 90 > th dose independent rect. 8 19
48 124.85 precipitation 0.1 270 < th dose independent rect. 14 16
49 124.85 precipitation 0.1 270 < th dose dependent rect. 14 16
50 124.86 wind 9.0 270 < th dose independent rect. 6 20
52 124.92 radiation 30.0 90 < th dose independent rect. 3 6
53 124.92 temperature 10.0 10 > th dose dependent rect. 9 5
55 124.96 wind 9.0 90 < th dose independent rect. 8 7
63 125.15 radiation 30.0 270 < th dose dependent rect. 1 7
68 125.17 wind 9.0 270 < th dose independent rect. 5 22
69 125.18 precipitation 0.1 90 < th dose independent rect. 8 19
70 125.18 precipitation 0.1 90 < th dose dependent rect. 8 19
77 125.37 radiation 20.0 270 < th dose independent rect. 1 7
78 125.40 atmosphere 995.0 90 > th dose independent rect. 8 7
84 125.63 temperature 10.0 270 > th dose dependent rect. 9 1
86 125.65 wind 5.0 270 < th dose independent rect. 1 6
91 125.86 radiation 1.0 90 > th dose independent rect. 8 7
104 125.99 radiation 20.0 270 < th dose independent rect. 2 4
107 125.99 temperature 10.0 270 > th dose independent rect. 6 20
109 126.07 precipitation 0.1 270 < th dose independent rect. 1 6
110 126.07 precipitation 0.1 270 < th dose dependent rect. 1 6
111 126.11 wind 5.0 270 < th dose independent rect. 3 2
116 126.20 radiation 40.0 270 < th dose dependent rect. 2 4
120 126.38 precipitation 0.1 270 < th dose independent rect. 3 2
121 126.38 precipitation 0.1 270 < th dose dependent rect. 3 2
123 126.41 temperature 10.0 270 > th dose independent rect. 1 6
125 126.41 temperature 30.0 270 < th dose independent rect. 1 6
126 126.41 humidity 50.0 270 > th dose independent rect. 1 6
128 126.41 atmosphere 995.0 270 > th dose independent rect. 1 6
129 126.41 atmosphere 1015.0 270 < th dose independent rect. 1 6
130 126.41 radiation 40.0 270 < th dose independent rect. 1 6
139 126.56 temperature 10.0 270 > th dose independent rect. 3 2
141 126.56 temperature 30.0 270 < th dose independent rect. 3 2
142 126.56 humidity 50.0 270 > th dose independent rect. 3 2
145 126.56 atmosphere 995.0 270 > th dose independent rect. 3 2
146 126.56 atmosphere 1010.0 270 < th dose independent rect. 3 2
148 126.56 radiation 20.0 270 < th dose independent rect. 3 2
151 126.56 temperature 10.0 270 > th dose independent rect. 5 22
152 126.57 precipitation 0.1 270 < th dose independent rect. 6 20
153 126.57 precipitation 0.1 270 < th dose dependent rect. 6 20
156 126.62 radiation 40.0 270 < th dose dependent rect. 3 2
160 126.66 wind 1.0 90 > th dose independent rect. 8 7
165 126.72 radiation 1.0 270 > th dose independent rect. 6 8
169 126.79 radiation 1.0 270 < th dose dependent rect. 3 2
174 126.83 radiation 1.0 270 < th dose independent rect. 3 2
205 127.12 temperature 10.0 270 > th dose dependent rect. 20 16
208 127.16 temperature 15.0 270 > th dose independent rect. 2 16
231 127.61 radiation 10.0 270 < th dose independent rect. 18 8
234 127.66 temperature 30.0 90 < th dose dependent rect. 3 5
238 127.71 wind 9.0 270 < th dose independent rect. 18 8
239 127.71 radiation 10.0 270 < th dose dependent rect. 18 8
251 127.78 temperature 10.0 270 > th dose independent rect. 18 8
252 127.78 humidity 50.0 270 > th dose independent rect. 18 8
257 127.78 atmosphere 1015.0 270 < th dose independent rect. 2 16
260 127.87 atmosphere 995.0 270 > th dose independent rect. 2 16
265 127.93 wind 9.0 90 < th dose dependent rect. 3 5
266 127.97 wind 7.0 10 < th dose independent rect. 3 6
272 128.03 temperature 15.0 10 > th dose independent rect. 15 18
280 128.05 precipitation 0.1 10 < th dose independent rect. 9 18
281 128.05 precipitation 0.1 10 < th dose dependent rect. 9 18
288 128.15 precipitation 0.1 270 < th dose independent rect. 18 8
290 128.15 precipitation 0.1 270 < th dose dependent rect. 18 8
293 128.21 wind 9.0 10 < th dose independent rect. 9 18
301 128.31 wind 1.0 270 > th dose independent rect. 1 6
311 128.36 humidity 50.0 10 > th dose independent rect. 9 5
314 128.40 precipitation 0.1 270 < th dose independent rect. 2 16
315 128.40 precipitation 0.1 270 < th dose dependent rect. 2 16
330 128.56 precipitation 0.1 10 < th dose independent rect. 3 6
331 128.56 precipitation 0.1 10 < th dose dependent rect. 3 6
357 128.66 atmosphere 995.0 270 > th dose independent rect. 18 8
359 128.70 temperature 10.0 10 > th dose independent rect. 3 6
361 128.70 temperature 30.0 10 < th dose independent rect. 3 6
362 128.70 humidity 50.0 10 > th dose independent rect. 3 6
364 128.70 atmosphere 995.0 10 > th dose independent rect. 3 6
365 128.70 atmosphere 1015.0 10 < th dose independent rect. 3 6
366 128.70 temperature 10.0 10 > th dose independent rect. 9 18
385 128.92 wind 1.0 270 > th dose independent rect. 2 4
389 128.93 radiation 1.0 10 > th dose independent rect. 9 7
390 128.96 atmosphere 1015.0 90 < th dose independent rect. 15 17
397 129.08 temperature 10.0 10 > th dose independent rect. 9 6
399 129.08 atmosphere 995.0 10 > th dose independent rect. 9 6
400 129.08 atmosphere 1015.0 10 < th dose independent rect. 9 6
401 129.08 precipitation 0.1 10 < th dose independent rect. 9 6
403 129.08 precipitation 0.1 10 < th dose dependent rect. 9 6
422 129.20 atmosphere 995.0 10 > th dose independent rect. 15 18
423 129.21 temperature 10.0 270 > th dose dependent rect. 8 3
424 129.22 humidity 50.0 90 > th dose independent rect. 8 19
465 129.61 wind 1.0 270 > th dose independent rect. 13 17
467 129.62 humidity 50.0 270 > th dose independent rect. 6 20
468 129.65 atmosphere 995.0 90 > th dose independent rect. 8 19
471 129.69 radiation 40.0 90 < th dose dependent rect. 15 17
472 129.71 wind 9.0 270 < th dose independent rect. 2 16
482 129.89 temperature 30.0 270 < th dose independent rect. 18 8
483 129.91 wind 9.0 10 < th dose independent rect. 9 6
550 130.22 wind 9.0 270 < th dose dependent rect. 6 8
558 130.28 humidity 50.0 270 > th dose dependent rect. 3 2
564 130.31 temperature 10.0 1440 > th dose independent rect. 10 5
568 130.31 temperature 10.0 1440 > th dose independent rect. 15 19
588 130.43 radiation 40.0 90 < th dose independent rect. 3 16
589 130.43 wind 9.0 10 < th dose independent rect. 15 18
689 130.87 humidity 50.0 270 > th dose dependent rect. 2 4
707 130.97 radiation 40.0 10 < th dose independent rect. 14 19
718 131.09 temperature 10.0 1440 > th dose independent rect. 4 6
721 131.09 atmosphere 995.0 1440 > th dose independent rect. 4 6
722 131.09 atmosphere 1015.0 1440 < th dose independent rect. 4 6
723 131.09 temperature 10.0 1440 > th dose independent rect. 10 18
733 131.14 wind 9.0 270 < th dose dependent rect. 1 6
771 131.34 wind 1.0 270 > th dose independent rect. 3 2
781 131.40 wind 9.0 10 < th dose dependent rect. 3 6
788 131.46 precipitation 0.1 10 < th dose independent rect. 15 18
789 131.46 precipitation 0.1 10 < th dose dependent rect. 15 18
813 131.60 humidity 50.0 270 > th dose independent rect. 9 1
846 131.68 atmosphere 995.0 90 > th dose dependent rect. 3 5
858 131.76 humidity 50.0 270 > th dose independent rect. 21 14
864 131.79 atmosphere 1015.0 10 < th dose independent rect. 15 18
881 131.86 humidity 50.0 10 > th dose independent rect. 9 18
904 132.00 temperature 15.0 270 > th dose independent rect. 11 10
908 132.01 radiation 1.0 270 < th dose dependent rect. 3 9
911 132.02 wind 9.0 270 < th dose dependent rect. 7 18
915 132.04 wind 1.0 270 > th dose independent rect. 6 8
937 132.13 radiation 1.0 270 < th dose dependent rect. 3 15
988 132.29 temperature 10.0 270 > th dose independent rect. 9 1
989 132.29 atmosphere 995.0 270 > th dose independent rect. 9 1
990 132.29 atmosphere 1015.0 270 < th dose independent rect. 9 1
991 132.29 temperature 10.0 270 > th dose independent rect. 10 23