Os02g0186500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein kinase-like protein.
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Os02g0186500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.67 | 0.551 | 10.8 | -1.18 | 0.946 | -1.46 | 1.22 | 0.981 | 0.0228 | 4.86 | 2.397 | 1533 | -- | -- |
| 138.01 | 0.547 | 10.8 | -1.09 | 0.944 | -1.61 | 1.37 | -- | 0.0608 | 4.74 | 1.83 | 1531 | -- | -- |
| 140.61 | 0.552 | 10.8 | -1.22 | 1.24 | -1.57 | -- | 2.06 | 0.0293 | 4.31 | 2.394 | 1652 | -- | -- |
| 142.67 | 0.556 | 10.8 | -1.1 | 0.975 | -1.61 | -- | -- | 0.0484 | 4.79 | 1.835 | 1532 | -- | -- |
| 180.99 | 0.627 | 10.8 | -1.2 | -- | -1.37 | -- | 0.839 | 0.00674 | -- | 2.677 | 1458 | -- | -- |
| 162.63 | 0.598 | 10.7 | -0.823 | 0.87 | -- | 1.21 | -- | 0.249 | 5.88 | -- | -- | -- | -- |
| 165.95 | 0.603 | 10.7 | -0.812 | 0.88 | -- | -- | -- | 0.246 | 6.16 | -- | -- | -- | -- |
| 181.16 | 0.627 | 10.8 | -1.08 | -- | -1.46 | -- | -- | 0.0308 | -- | 2.21 | 1452 | -- | -- |
| 171.19 | 0.609 | 10.7 | -- | 0.909 | -1.05 | -- | -- | 0.21 | 5.21 | 3.046 | 1531 | -- | -- |
| 206.08 | 0.671 | 10.7 | -0.788 | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
| 183.34 | 0.633 | 10.7 | -- | 0.868 | -- | -- | -- | 0.336 | 6.21 | -- | -- | -- | -- |
| 208.14 | 0.672 | 10.7 | -- | -- | -0.796 | -- | -- | 0.214 | -- | 6.871 | 1456 | -- | -- |
| 222.45 | 0.696 | 10.7 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.59 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 9 |
| 3 | 135.17 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 2 |
| 4 | 135.40 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 5 | 135.45 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 8 | 135.63 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 11 | 135.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 9 |
| 14 | 136.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 17 | 136.64 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 18 | 136.65 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 33 | 136.90 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 34 | 136.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 35 | 136.98 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 58 | 137.28 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 60 | 137.32 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 62 | 137.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 63 | 137.36 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 114 | 138.06 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 118 | 138.08 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 120 | 138.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 121 | 138.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 138 | 138.24 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 11 |
| 141 | 138.29 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 162 | 138.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 167 | 138.39 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 179 | 138.42 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 183 | 138.48 | radiation | 1.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 184 | 138.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 186 | 138.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 187 | 138.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 230 | 138.56 | radiation | 1.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 278 | 138.71 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 305 | 138.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 320 | 138.87 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 339 | 138.93 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 341 | 138.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 343 | 138.96 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 380 | 139.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 381 | 139.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 394 | 139.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 398 | 139.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 489 | 139.23 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 515 | 139.29 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 517 | 139.30 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 540 | 139.39 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 542 | 139.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 551 | 139.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 552 | 139.47 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 554 | 139.47 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 566 | 139.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 569 | 139.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 573 | 139.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 582 | 139.54 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 594 | 139.58 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 625 | 139.61 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 640 | 139.64 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 641 | 139.64 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 651 | 139.65 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 722 | 139.75 | temperature | 30.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 740 | 139.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 772 | 139.83 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 827 | 139.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 836 | 139.97 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 854 | 140.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 876 | 140.06 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 896 | 140.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 899 | 140.11 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 931 | 140.23 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 951 | 140.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 967 | 140.29 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 981 | 140.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 16 |