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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0186300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.26 (0.0154) R2 : 0.00488
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0483 (0.0323) R2dN8 : 0.0063 R2N8 : 0.00488
σ : 0.289
deviance : 38.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.9 0.274 3.27 0.201 0.219 0.307 -0.0543 0.804 -0.0909 7.29 92.17 4873 -- --
34.74 0.275 3.26 0.144 0.21 0.303 -0.134 -- -0.0989 7.05 92 4786 -- --
33.9 0.271 3.27 0.201 0.218 0.308 -- 0.821 -0.0913 7.35 92 4894 -- --
34.79 0.275 3.26 0.152 0.222 0.341 -- -- -0.11 7.09 92 4788 -- --
35.58 0.278 3.27 0.208 -- 0.288 -- 0.848 -0.0811 -- 91.62 5798 -- --
36.15 0.282 3.25 0.127 0.181 -- -0.151 -- -0.0376 7.28 -- -- -- --
36.21 0.282 3.25 0.124 0.18 -- -- -- -0.0372 7.41 -- -- -- --
36.63 0.282 3.27 0.151 -- 0.318 -- -- -0.107 -- 91.49 5734 -- --
35.28 0.277 3.26 -- 0.195 0.339 -- -- -0.112 6.99 89 4578 -- --
37.94 0.288 3.25 0.127 -- -- -- -- -0.0343 -- -- -- -- --
36.61 0.283 3.25 -- 0.181 -- -- -- -0.051 7.36 -- -- -- --
37.18 0.284 3.27 -- -- 0.291 -- -- -0.108 -- 88.45 5734 -- --
38.36 0.289 3.26 -- -- -- -- -- -0.0483 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.15 atmosphere 1000.0 30 > th dose independent rect. 3 23
5 30.76 atmosphere 1005.0 10 > th dose dependent rect. 2 2
6 30.83 atmosphere 1005.0 90 > th dose dependent rect. 2 1
7 30.87 atmosphere 1010.0 30 < th dose dependent rect. 2 1
13 31.25 wind 3.0 10 < th dose independent rect. 2 1
16 31.26 wind 5.0 10 < th dose dependent rect. 2 1
19 31.27 temperature 15.0 10 > th dose independent rect. 3 23
23 31.28 temperature 10.0 10 > th dose dependent rect. 2 1
28 31.30 temperature 10.0 10 > th dose independent rect. 2 1
30 31.30 temperature 30.0 10 < th dose independent rect. 2 1
31 31.30 humidity 50.0 10 > th dose independent rect. 2 1
34 31.30 atmosphere 995.0 10 > th dose independent rect. 2 1
35 31.30 atmosphere 1010.0 10 < th dose independent rect. 2 1
37 31.30 radiation 1.0 10 < th dose independent rect. 2 1
42 31.30 precipitation 0.1 10 < th dose independent rect. 2 1
44 31.30 radiation 1.0 10 < th dose dependent rect. 2 1
49 31.30 precipitation 0.1 10 < th dose dependent rect. 2 1
58 31.31 humidity 50.0 10 > th dose dependent rect. 2 1
81 31.32 temperature 30.0 30 < th dose dependent rect. 2 1
99 31.35 precipitation 0.1 10 < th dose independent rect. 3 23
101 31.35 precipitation 0.1 10 < th dose dependent rect. 3 23
102 31.36 wind 1.0 30 > th dose independent rect. 2 1
108 31.40 atmosphere 995.0 30 > th dose dependent rect. 2 1
109 31.41 wind 9.0 30 < th dose independent rect. 3 23
128 31.87 radiation 1.0 43200 < th dose dependent rect. 3 1
139 32.19 radiation 1.0 4320 < th dose dependent rect. 3 1
144 32.22 wind 9.0 1440 < th dose independent rect. 3 1
145 32.22 temperature 10.0 1440 > th dose independent rect. 3 1
148 32.22 temperature 30.0 1440 < th dose independent rect. 3 1
152 32.22 humidity 50.0 1440 > th dose independent rect. 3 1
161 32.22 atmosphere 995.0 1440 > th dose independent rect. 3 1
162 32.22 radiation 1.0 1440 < th dose independent rect. 3 1
182 32.22 temperature 10.0 1440 > th dose independent rect. 4 23
202 32.31 humidity 50.0 30 > th dose independent rect. 3 23
208 32.46 atmosphere 995.0 720 > th dose independent rect. 23 16
212 32.50 humidity 90.0 90 < th dose independent rect. 2 1
215 32.58 humidity 80.0 14400 < th dose dependent rect. 2 7
254 32.87 humidity 80.0 14400 < th dose dependent rect. 21 13
282 33.12 atmosphere 995.0 720 > th dose independent rect. 7 8
290 33.19 atmosphere 1000.0 720 > th dose independent rect. 3 8
291 33.20 atmosphere 1015.0 30 < th dose independent rect. 3 23
300 33.27 humidity 80.0 4320 > th dose independent rect. 7 4
301 33.31 temperature 10.0 720 > th dose independent rect. 15 8
302 33.31 temperature 10.0 720 > th dose independent rect. 23 16
307 33.34 humidity 70.0 14400 > th dose independent rect. 20 14
308 33.34 humidity 70.0 14400 < th dose independent rect. 20 14
310 33.36 humidity 90.0 720 < th dose independent rect. 1 3
311 33.36 humidity 70.0 14400 < th dose independent rect. 6 4
341 33.40 temperature 10.0 720 > th dose independent rect. 3 8
343 33.40 temperature 10.0 720 > th dose independent rect. 11 16
344 33.40 wind 5.0 14400 < th dose dependent rect. 11 1
346 33.40 wind 9.0 30 < th dose dependent rect. 3 23
349 33.41 humidity 70.0 4320 > th dose dependent rect. 3 7
366 33.45 wind 1.0 14400 < th dose dependent rect. 6 1
372 33.47 wind 9.0 720 < th dose independent rect. 3 8
374 33.48 precipitation 0.1 720 < th dose independent rect. 15 8
378 33.48 precipitation 0.1 720 < th dose dependent rect. 15 8
384 33.49 humidity 70.0 4320 > th dose dependent rect. 5 4
389 33.50 humidity 80.0 4320 > th dose dependent rect. 7 2
394 33.52 wind 3.0 14400 > th dose independent rect. 10 2
428 33.54 wind 5.0 14400 < th dose independent rect. 11 4
436 33.55 wind 1.0 14400 > th dose dependent rect. 11 1
462 33.59 wind 5.0 14400 < th dose independent rect. 10 7
487 33.63 humidity 50.0 720 > th dose independent rect. 3 8
493 33.64 wind 5.0 14400 > th dose independent rect. 11 4
495 33.64 wind 5.0 14400 > th dose independent rect. 10 7
504 33.64 humidity 50.0 4320 > th dose dependent rect. 7 1
521 33.65 atmosphere 1000.0 10 > th dose independent rect. 14 12
528 33.66 wind 3.0 14400 > th dose dependent rect. 10 5
535 33.67 wind 9.0 720 < th dose independent rect. 19 8
543 33.68 wind 3.0 14400 < th dose independent rect. 10 2
552 33.69 wind 3.0 14400 > th dose independent rect. 19 1
586 33.72 wind 9.0 720 < th dose independent rect. 15 8
589 33.72 temperature 30.0 30 < th dose independent rect. 3 23
594 33.73 wind 3.0 14400 < th dose independent rect. 19 1
597 33.73 precipitation 0.1 720 < th dose independent rect. 11 16
606 33.73 precipitation 0.1 720 < th dose dependent rect. 11 16
630 33.75 humidity 50.0 4320 > th dose dependent rect. 24 14
633 33.75 radiation 20.0 30 < th dose dependent rect. 3 23
636 33.76 atmosphere 1000.0 10 < th dose independent rect. 7 20
639 33.76 humidity 50.0 4320 > th dose dependent sin 5 NA
668 33.78 atmosphere 1000.0 10 > th dose independent rect. 21 23
675 33.78 humidity 90.0 4320 < th dose dependent rect. 3 12
698 33.80 wind 9.0 720 < th dose independent rect. 15 16
730 33.81 humidity 80.0 14400 < th dose dependent sin 8 NA
750 33.82 atmosphere 1000.0 10 > th dose independent rect. 16 10
751 33.82 humidity 70.0 4320 > th dose independent rect. 7 11
776 33.82 humidity 90.0 4320 < th dose dependent rect. 23 16
780 33.83 humidity 90.0 90 < th dose dependent rect. 2 1
784 33.83 temperature 25.0 720 > th dose dependent rect. 3 5
797 33.83 humidity 50.0 30 > th dose dependent rect. 3 23
805 33.84 temperature 10.0 720 > th dose independent rect. 7 8
808 33.84 atmosphere 1015.0 720 < th dose independent rect. 7 8
821 33.84 temperature 10.0 720 > th dose independent rect. 15 16
834 33.84 temperature 25.0 720 > th dose dependent rect. 6 2
858 33.85 humidity 90.0 4320 < th dose dependent sin 5 NA
859 33.85 wind 1.0 14400 < th dose dependent rect. 4 4
879 33.86 humidity 70.0 4320 > th dose independent sin 3 NA
915 33.87 temperature 10.0 720 > th dose independent rect. 19 8
916 33.87 temperature 30.0 720 < th dose independent rect. 19 8
918 33.87 humidity 50.0 720 > th dose independent rect. 19 8
919 33.87 atmosphere 995.0 720 > th dose independent rect. 19 8
920 33.87 radiation 1.0 720 < th dose independent rect. 19 8
932 33.87 temperature 10.0 720 > th dose independent rect. 3 16
937 33.87 temperature 30.0 1440 > th dose independent rect. 14 21
938 33.87 temperature 30.0 1440 < th dose independent rect. 14 21
939 33.87 radiation 40.0 10 < th dose independent rect. 3 23
950 33.87 radiation 1.0 720 < th dose dependent rect. 19 8
970 33.88 humidity 70.0 4320 > th dose independent rect. 10 8
989 33.88 wind 7.0 14400 < th dose dependent rect. 10 5