Os02g0186100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0186100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.4 | 0.707 | 3.2 | -0.168 | 0.205 | 3.47 | -0.457 | 6.14 | -0.0319 | 9.34 | 19.4 | 2 | -- | -- |
| 236.46 | 0.722 | 3.15 | -0.125 | 0.197 | 1.01 | -0.674 | -- | -0.00319 | 9.38 | 21 | 10 | -- | -- |
| 227.02 | 0.702 | 3.21 | -0.189 | 0.209 | 3.62 | -- | 6.56 | -0.033 | 10 | 19.36 | 2 | -- | -- |
| 238.09 | 0.723 | 3.15 | -0.151 | 0.197 | 1 | -- | -- | -0.00642 | 9.57 | 20.9 | 6 | -- | -- |
| 229.42 | 0.705 | 3.21 | -0.187 | -- | 3.86 | -- | 7.16 | -0.0397 | -- | 19.18 | 2 | -- | -- |
| 244.89 | 0.734 | 3.17 | -0.297 | 0.153 | -- | -0.616 | -- | -0.0859 | 8.35 | -- | -- | -- | -- |
| 246.04 | 0.735 | 3.17 | -0.317 | 0.158 | -- | -- | -- | -0.0862 | 7.81 | -- | -- | -- | -- |
| 237.07 | 0.717 | 3.15 | -0.231 | -- | 0.78 | -- | -- | 0.0013 | -- | 23.2 | 404 | -- | -- |
| 238.62 | 0.719 | 3.15 | -- | 0.2 | 1.08 | -- | -- | 0.0156 | 9.73 | 20.9 | 3 | -- | -- |
| 247.4 | 0.735 | 3.18 | -0.315 | -- | -- | -- | -- | -0.084 | -- | -- | -- | -- | -- |
| 248.69 | 0.738 | 3.16 | -- | 0.156 | -- | -- | -- | -0.051 | 7.95 | -- | -- | -- | -- |
| 236.59 | 0.716 | 3.14 | -- | -- | 0.986 | -- | -- | 0.0725 | -- | 23.15 | 442 | -- | -- |
| 250.02 | 0.738 | 3.17 | -- | -- | -- | -- | -- | -0.0491 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 228.31 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 22 |
| 5 | 228.37 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 7 | 228.40 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 14 |
| 21 | 228.96 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 8 |
| 33 | 229.28 | temperature | 20 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 34 | 229.48 | temperature | 20 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 39 | 229.52 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 21 |
| 44 | 229.54 | temperature | 20 | 10 | < th | dose dependent | sin | 7 | NA |
| 47 | 229.56 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 18 |
| 64 | 229.62 | temperature | 20 | 10 | < th | dose dependent | rect. | 15 | 22 |
| 72 | 229.64 | temperature | 20 | 10 | < th | dose dependent | no | NA | NA |
| 73 | 229.64 | temperature | 20 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 77 | 229.66 | temperature | 20 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 111 | 229.76 | temperature | 20 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 136 | 230.29 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 12 |
| 143 | 230.34 | temperature | 20 | 10 | < th | dose dependent | rect. | 15 | 16 |
| 158 | 230.40 | temperature | 20 | 270 | < th | dose dependent | rect. | 8 | 20 |
| 310 | 231.22 | temperature | 20 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 320 | 231.25 | temperature | 20 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 333 | 231.33 | temperature | 20 | 270 | < th | dose dependent | sin | 14 | NA |
| 355 | 231.60 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 5 |
| 359 | 231.63 | temperature | 20 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 404 | 231.72 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 442 | 231.81 | atmosphere | 1015 | 1440 | > th | dose dependent | sin | 17 | NA |
| 553 | 232.10 | temperature | 20 | 720 | < th | dose independent | rect. | 20 | 5 |
| 581 | 232.17 | atmosphere | 1015 | 1440 | > th | dose dependent | sin | 8 | NA |
| 639 | 232.40 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 654 | 232.45 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 710 | 232.64 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 5 |
| 714 | 232.68 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 715 | 232.68 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 19 | 14 |
| 740 | 232.76 | atmosphere | 1015 | 1440 | > th | dose independent | sin | 8 | NA |
| 750 | 232.79 | temperature | 20 | 720 | < th | dose dependent | rect. | 20 | 4 |
| 773 | 232.84 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 774 | 232.85 | temperature | 20 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 780 | 232.87 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 829 | 232.97 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 830 | 232.97 | atmosphere | 1015 | 1440 | > th | dose dependent | no | NA | NA |
| 933 | 233.11 | wind | 1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 951 | 233.17 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 17 |
| 981 | 233.26 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 22 | 3 |