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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0185900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : E-class P450, group I family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0276) R2 : 0.000472
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.027 (0.0581) R2dN8 : 0.00061 R2N8 : 0.000472
σ : 0.52
deviance : 123.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
111.19 0.495 2.92 -0.138 0.128 0.436 0.451 -1.54 0.0193 10.7 20.95 457 -- --
112.29 0.494 2.94 -0.207 0.117 0.749 0.31 -- 0.038 10.6 22.74 437 -- --
111.71 0.492 2.92 -0.115 0.151 0.555 -- -1.05 0.0376 10.7 22.49 307 -- --
112.69 0.494 2.94 -0.208 0.129 0.755 -- -- 0.0321 11.1 22.7 388 -- --
112.7 0.494 2.93 -0.121 -- 0.603 -- -0.809 0.0457 -- 22.84 467 -- --
118.55 0.51 2.96 -0.387 0.146 -- 0.308 -- -0.0691 10.5 -- -- -- --
118.89 0.511 2.96 -0.375 0.15 -- -- -- -0.069 9.66 -- -- -- --
113.47 0.496 2.94 -0.197 -- 0.768 -- -- 0.0372 -- 22.65 471 -- --
113.66 0.497 2.93 -- 0.12 0.861 -- -- 0.0651 11.3 22.53 418 -- --
120.22 0.512 2.96 -0.377 -- -- -- -- -0.0688 -- -- -- -- --
122.6 0.518 2.95 -- 0.151 -- -- -- -0.0272 9.85 -- -- -- --
114.37 0.498 2.93 -- -- 0.88 -- -- 0.0668 -- 22.44 471 -- --
123.96 0.52 2.95 -- -- -- -- -- -0.027 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.44 temperature 20.0 270 > th dose independent rect. 1 17
6 107.78 temperature 15.0 4320 > th dose independent rect. 12 2
9 108.26 temperature 15.0 10 > th dose dependent rect. 2 18
22 108.84 wind 7.0 10 > th dose dependent rect. 11 4
27 108.94 temperature 20.0 1440 < th dose dependent rect. 7 1
28 108.95 wind 9.0 270 > th dose dependent rect. 10 1
41 109.15 wind 9.0 10 > th dose independent rect. 11 3
63 109.36 wind 7.0 10 > th dose dependent rect. 21 18
65 109.38 radiation 1.0 4320 < th dose independent rect. 10 2
66 109.38 radiation 1.0 4320 < th dose dependent rect. 10 2
77 109.41 wind 1.0 90 > th dose dependent rect. 10 3
91 109.46 wind 7.0 10 > th dose dependent rect. 2 13
128 109.70 humidity 90.0 14400 > th dose dependent rect. 22 2
130 109.75 wind 1.0 10 > th dose dependent rect. 10 4
137 109.82 radiation 1.0 4320 < th dose independent rect. 8 1
139 109.82 radiation 1.0 4320 < th dose dependent rect. 8 1
153 109.92 radiation 1.0 4320 > th dose independent rect. 8 1
154 109.92 wind 9.0 10 > th dose independent rect. 21 17
158 109.92 temperature 10.0 90 > th dose dependent rect. 1 23
161 109.93 temperature 15.0 10 > th dose dependent rect. 2 22
166 109.96 radiation 1.0 4320 < th dose dependent rect. 7 4
179 110.04 wind 9.0 270 > th dose independent rect. 9 2
198 110.11 radiation 1.0 4320 > th dose independent rect. 10 1
199 110.11 radiation 1.0 4320 < th dose independent rect. 7 4
201 110.12 radiation 1.0 4320 > th dose independent rect. 7 4
229 110.13 wind 1.0 10 > th dose dependent rect. 7 7
237 110.16 temperature 25.0 720 < th dose dependent rect. 20 16
265 110.26 temperature 15.0 4320 > th dose independent rect. 8 5
313 110.44 humidity 90.0 14400 > th dose independent rect. 22 2
316 110.44 wind 1.0 10 > th dose dependent rect. 5 9
322 110.46 humidity 90.0 14400 < th dose independent rect. 22 1
331 110.48 temperature 20.0 270 < th dose independent rect. 2 21
335 110.49 radiation 1.0 720 < th dose dependent rect. 5 1
353 110.53 humidity 80.0 14400 > th dose dependent rect. 19 11
365 110.54 temperature 25.0 270 < th dose dependent rect. 2 21
377 110.57 temperature 25.0 720 < th dose dependent sin 8 NA
394 110.60 wind 1.0 90 > th dose dependent rect. 7 6
400 110.61 humidity 90.0 14400 < th dose independent rect. 21 3
414 110.63 wind 5.0 10 > th dose dependent rect. 11 1
440 110.68 radiation 1.0 14400 < th dose dependent rect. 21 6
448 110.70 humidity 90.0 14400 > th dose independent rect. 21 4
455 110.70 temperature 10.0 720 > th dose dependent rect. 21 16
466 110.73 humidity 90.0 14400 < th dose independent rect. 19 6
467 110.73 wind 7.0 10 > th dose dependent sin 5 NA
468 110.73 temperature 30.0 720 < th dose dependent rect. 3 5
490 110.76 humidity 80.0 14400 > th dose dependent sin 10 NA
498 110.78 wind 7.0 90 > th dose independent rect. 10 4
499 110.78 temperature 20.0 270 < th dose independent rect. 4 11
523 110.81 temperature 25.0 10 < th dose dependent rect. 5 8
545 110.83 temperature 10.0 90 > th dose dependent rect. 13 22
554 110.84 temperature 30.0 10 < th dose dependent rect. 20 17
568 110.86 temperature 20.0 270 < th dose independent rect. 4 7
579 110.87 temperature 10.0 720 > th dose dependent sin 7 NA
587 110.88 temperature 15.0 4320 < th dose dependent rect. 10 3
596 110.89 humidity 90.0 14400 > th dose dependent rect. 20 15
615 110.90 temperature 10.0 270 > th dose dependent rect. 11 23
626 110.92 precipitation 0.1 14400 > th dose independent rect. 23 1
629 110.92 precipitation 0.1 14400 > th dose dependent rect. 23 1
635 110.92 temperature 25.0 270 < th dose dependent rect. 3 9
647 110.94 radiation 30.0 90 < th dose independent rect. 11 2
666 110.95 humidity 80.0 14400 > th dose dependent rect. 1 8
668 110.95 temperature 15.0 4320 < th dose dependent rect. 6 11
692 110.97 wind 9.0 10 > th dose independent rect. 11 1
694 110.97 temperature 15.0 4320 < th dose independent rect. 11 2
762 111.02 temperature 15.0 90 > th dose independent rect. 13 22
765 111.02 temperature 30.0 720 < th dose dependent rect. 23 9
780 111.03 temperature 10.0 43200 > th dose independent rect. 9 5
803 111.04 radiation 1.0 270 < th dose dependent rect. 5 7
814 111.05 humidity 90.0 14400 < th dose independent rect. 18 12
823 111.05 temperature 25.0 270 < th dose dependent rect. 3 12
830 111.06 humidity 90.0 14400 < th dose independent rect. 19 16
847 111.07 humidity 80.0 30 > th dose independent rect. 7 19
867 111.08 temperature 20.0 270 > th dose independent rect. 1 8
872 111.08 atmosphere 1005.0 90 > th dose independent rect. 10 16
921 111.11 temperature 20.0 270 < th dose independent sin 4 NA
928 111.11 humidity 90.0 270 > th dose dependent rect. 9 1
933 111.11 temperature 15.0 270 > th dose dependent rect. 24 9
960 111.13 temperature 20.0 270 > th dose independent sin 3 NA
992 111.14 humidity 50.0 14400 > th dose dependent rect. 21 7