Os02g0185300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0185300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.99 | 0.488 | 11.4 | 1.83 | 1.92 | 1.38 | -0.452 | 1.33 | 0.136 | 2.34 | 19.61 | 6390 | -- | -- |
| 110.1 | 0.489 | 11.3 | 1.98 | 1.94 | 1.06 | -0.222 | -- | 0.176 | 2.24 | 19.9 | 6375 | -- | -- |
| 108.71 | 0.486 | 11.4 | 1.83 | 1.91 | 1.37 | -- | 1.31 | 0.137 | 2.34 | 19.6 | 6260 | -- | -- |
| 110.36 | 0.489 | 11.3 | 1.93 | 1.91 | 1.02 | -- | -- | 0.161 | 2.33 | 19.9 | 6274 | -- | -- |
| 305.23 | 0.818 | 11.4 | 1.54 | -- | 0.993 | -- | 0.327 | 0.0631 | -- | 19.6 | 6260 | -- | -- |
| 126.63 | 0.528 | 11.4 | 1.24 | 1.9 | -- | -0.481 | -- | -0.125 | 2.38 | -- | -- | -- | -- |
| 127.47 | 0.529 | 11.4 | 1.25 | 1.9 | -- | -- | -- | -0.122 | 2.37 | -- | -- | -- | -- |
| 303.3 | 0.815 | 11.4 | 1.55 | -- | 0.949 | -- | -- | 0.0801 | -- | 19.9 | 6274 | -- | -- |
| 165.87 | 0.603 | 11.4 | -- | 1.86 | 0.206 | -- | -- | -0.2 | 2.44 | 22.7 | 2435 | -- | -- |
| 340.18 | 0.862 | 11.4 | 1.33 | -- | -- | -- | -- | -0.076 | -- | -- | -- | -- | -- |
| 168.71 | 0.608 | 11.4 | -- | 1.92 | -- | -- | -- | -0.262 | 2.38 | -- | -- | -- | -- |
| 357.45 | 0.883 | 11.4 | -- | -- | 0.635 | -- | -- | -0.0368 | -- | 22.7 | 2435 | -- | -- |
| 386.91 | 0.918 | 11.4 | -- | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.27 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 14 | 103.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 19 | 103.79 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 24 | 104.38 | wind | 9 | 14400 | > th | dose independent | rect. | 21 | 20 |
| 28 | 104.54 | wind | 9 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 30 | 104.56 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 31 | 104.56 | wind | 9 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 32 | 104.59 | wind | 9 | 14400 | > th | dose dependent | sin | 4 | NA |
| 43 | 104.71 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 46 | 104.84 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 49 | 104.87 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 53 | 104.89 | wind | 9 | 14400 | > th | dose independent | sin | 3 | NA |
| 56 | 104.91 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 58 | 104.92 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 16 |
| 59 | 104.92 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 62 | 104.93 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 70 | 105.04 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 75 | 105.06 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 107 | 105.21 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 110 | 105.25 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 114 | 105.29 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 116 | 105.29 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 126 | 105.33 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 130 | 105.36 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 131 | 105.36 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 143 | 105.43 | wind | 9 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 151 | 105.47 | wind | 9 | 14400 | < th | dose independent | sin | 3 | NA |
| 161 | 105.50 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 170 | 105.54 | wind | 9 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 173 | 105.55 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 176 | 105.56 | wind | 9 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 178 | 105.57 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 186 | 105.59 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 16 |
| 187 | 105.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 198 | 105.64 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 203 | 105.66 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 238 | 105.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 248 | 105.87 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 260 | 105.92 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 267 | 105.94 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 277 | 105.98 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 19 |
| 349 | 106.27 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 367 | 106.34 | wind | 9 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 374 | 106.37 | wind | 9 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 450 | 106.83 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 466 | 106.93 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 472 | 106.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 473 | 106.95 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 500 | 107.12 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 513 | 107.19 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 520 | 107.21 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 567 | 107.32 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 582 | 107.35 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 593 | 107.37 | wind | 9 | 14400 | > th | dose independent | no | NA | NA |
| 610 | 107.39 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 640 | 107.45 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 653 | 107.49 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 661 | 107.51 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 685 | 107.55 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 715 | 107.59 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 733 | 107.62 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 765 | 107.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 856 | 107.89 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 19 | NA |
| 858 | 107.89 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 895 | 107.97 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 10 | 19 |
| 896 | 107.98 | wind | 9 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 906 | 107.99 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 908 | 108.00 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 915 | 108.00 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 916 | 108.00 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 927 | 108.02 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 929 | 108.02 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 930 | 108.02 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 967 | 108.07 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 983 | 108.09 | radiation | 10 | 14400 | > th | dose independent | rect. | 17 | 14 |