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Os02g0185200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.47 (0.0304) R2 : 0.75
β1 : 2.34 (0.111) R2dD : 0.253 R2D : 0.163
β2 : 2.22 (0.0751) R2dC : 0.483 R2C : 0.46
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.704 (0.0648) R2dN8 : 0.0867 R2N8 : 0.0169
σ : 0.571
deviance : 148.78
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_____
C
peak time of C : 9.12
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
137.6 0.546 9.42 2.53 2.23 -8.31 -0.19 24.7 0.68 9.06 0.1 30 -- --
145.48 0.566 9.47 2.37 2.23 -1.79 -0.195 -- 0.701 9.1 0.5696 12 -- --
137.73 0.547 9.42 2.53 2.23 -8.35 -- 24.9 0.68 9.07 0.1043 30 -- --
144.21 0.559 9.48 2.4 2.2 -1.41 -- -- 0.693 9.13 0.3076 53 -- --
420.72 0.955 9.48 2.6 -- -9.16 -- 24.8 0.683 -- 0.3009 43 -- --
148.64 0.572 9.47 2.35 2.22 -- -0.206 -- 0.704 9.12 -- -- -- --
148.78 0.571 9.47 2.34 2.22 -- -- -- 0.704 9.12 -- -- -- --
409.86 0.943 9.54 2.52 -- -2.24 -- -- 0.682 -- 0.7343 539 -- --
292.12 0.8 9.53 -- 2.23 -1.19 -- -- 0.44 9.03 0.5 9 -- --
434.26 0.974 9.53 2.34 -- -- -- -- 0.716 -- -- -- -- --
293.53 0.801 9.53 -- 2.22 -- -- -- 0.443 9.04 -- -- -- --
567.63 1.11 9.6 -- -- -1.37 -- -- 0.425 -- 1.288 394 -- --
578.41 1.12 9.59 -- -- -- -- -- 0.457 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 130.93 precipitation 0.1 270 > th dose independent rect. 20 8
2 131.07 temperature 20.0 720 > th dose dependent rect. 4 2
4 131.29 precipitation 0.1 270 > th dose independent rect. 2 2
5 131.29 precipitation 0.1 270 > th dose dependent rect. 2 2
8 131.74 humidity 60.0 720 > th dose dependent rect. 18 1
9 131.80 humidity 80.0 43200 > th dose dependent rect. 12 16
10 131.81 humidity 80.0 43200 > th dose dependent rect. 17 9
11 131.83 humidity 80.0 43200 > th dose dependent rect. 18 7
12 131.83 humidity 80.0 43200 > th dose dependent rect. 13 14
13 131.86 precipitation 0.1 270 > th dose dependent rect. 20 8
15 131.90 humidity 80.0 43200 > th dose dependent sin 15 NA
16 131.92 humidity 90.0 43200 < th dose independent rect. 20 7
18 131.94 humidity 90.0 43200 < th dose independent rect. 19 9
21 132.00 humidity 80.0 43200 > th dose dependent rect. 16 11
27 132.13 humidity 90.0 720 > th dose dependent rect. 20 1
49 132.30 humidity 90.0 43200 > th dose independent rect. 20 7
52 132.31 humidity 90.0 43200 > th dose independent rect. 20 9
55 132.34 humidity 80.0 43200 > th dose dependent rect. 19 5
75 132.53 precipitation 0.1 270 > th dose independent rect. 17 11
77 132.55 humidity 80.0 43200 > th dose independent rect. 1 18
101 132.73 humidity 80.0 43200 > th dose dependent rect. 21 2
138 133.05 humidity 90.0 43200 < th dose independent sin 12 NA
144 133.11 humidity 90.0 43200 < th dose independent rect. 14 16
159 133.20 humidity 90.0 43200 > th dose independent rect. 23 1
160 133.20 humidity 90.0 43200 < th dose independent rect. 21 1
162 133.20 humidity 90.0 720 < th dose dependent rect. 19 2
171 133.24 humidity 90.0 720 > th dose dependent rect. 19 3
177 133.28 humidity 90.0 43200 > th dose independent rect. 21 1
184 133.34 humidity 80.0 43200 > th dose dependent rect. 19 20
203 133.44 humidity 80.0 43200 < th dose independent rect. 2 16
211 133.46 radiation 10.0 43200 > th dose dependent rect. 5 2
227 133.47 humidity 80.0 43200 < th dose independent rect. 1 18
237 133.51 temperature 25.0 10 > th dose independent rect. 5 3
275 133.66 humidity 90.0 720 < th dose independent rect. 20 2
286 133.69 humidity 90.0 43200 > th dose independent rect. 14 15
297 133.74 humidity 90.0 43200 > th dose dependent rect. 22 5
327 133.85 humidity 90.0 43200 > th dose independent sin 12 NA
340 133.88 humidity 80.0 43200 > th dose independent sin 2 NA
356 133.95 radiation 1.0 1440 < th dose independent rect. 8 7
357 133.95 radiation 1.0 1440 < th dose dependent rect. 8 7
364 133.99 radiation 1.0 1440 < th dose independent rect. 8 4
367 133.99 radiation 1.0 1440 < th dose dependent rect. 8 4
374 134.01 radiation 1.0 1440 > th dose independent rect. 13 2
376 134.02 radiation 1.0 4320 < th dose independent rect. 12 1
378 134.02 radiation 1.0 4320 < th dose dependent rect. 12 1
409 134.10 radiation 10.0 1440 > th dose independent rect. 11 2
411 134.12 humidity 80.0 43200 > th dose dependent no NA NA
422 134.16 radiation 1.0 1440 < th dose independent rect. 9 1
425 134.16 radiation 1.0 1440 < th dose dependent rect. 9 1
431 134.19 radiation 1.0 1440 > th dose independent rect. 8 7
448 134.25 radiation 1.0 1440 < th dose independent rect. 14 1
449 134.25 wind 7.0 43200 < th dose independent rect. 14 4
451 134.25 radiation 1.0 1440 < th dose dependent rect. 14 1
474 134.32 radiation 1.0 90 > th dose independent rect. 18 13
498 134.35 precipitation 0.1 30 > th dose independent rect. 3 21
502 134.36 precipitation 0.1 270 > th dose independent sin 12 NA
511 134.38 radiation 10.0 43200 < th dose independent rect. 6 2
513 134.39 wind 7.0 43200 > th dose independent rect. 14 3
539 134.46 radiation 30.0 43200 > th dose independent rect. 7 1
555 134.46 radiation 40.0 43200 > th dose dependent sin 11 NA
572 134.47 radiation 30.0 43200 < th dose dependent rect. 18 13
575 134.48 radiation 40.0 43200 < th dose independent rect. 7 3
582 134.49 radiation 40.0 43200 < th dose independent sin 10 NA
583 134.49 humidity 70.0 720 > th dose independent rect. 17 2
589 134.49 radiation 40.0 43200 < th dose independent rect. 24 10
618 134.51 precipitation 0.1 270 > th dose dependent sin 11 NA
648 134.57 radiation 30.0 43200 < th dose dependent rect. 4 3
649 134.57 radiation 30.0 43200 < th dose dependent rect. 24 7
650 134.57 radiation 30.0 43200 < th dose dependent rect. 20 11
655 134.58 radiation 40.0 43200 < th dose independent rect. 13 20
661 134.58 radiation 30.0 43200 < th dose dependent rect. 22 9
674 134.60 radiation 40.0 43200 > th dose dependent rect. 8 3
801 134.65 humidity 80.0 43200 > th dose dependent sin 6 NA
813 134.67 radiation 10.0 43200 < th dose independent rect. 16 16
817 134.67 humidity 90.0 720 > th dose dependent rect. 18 7
821 134.68 radiation 1.0 1440 > th dose independent rect. 9 1
927 134.76 radiation 10.0 43200 < th dose independent sin 11 NA
960 134.77 wind 7.0 43200 < th dose independent rect. 16 2