Os02g0184900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0184900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.69 | 0.79 | 6.55 | -0.184 | 2.09 | -2.83 | -0.195 | -4.7 | 0.249 | 9.19 | 1.079 | 13805 | 7.19 | -- |
| 304.34 | 0.813 | 6.48 | 1.07 | 2.16 | -2.67 | 0.307 | -- | 0.508 | 9.38 | 1.5 | 13796 | 6.25 | -- |
| 282.65 | 0.783 | 6.55 | -0.206 | 2.06 | -2.84 | -- | -4.74 | 0.247 | 9.13 | 1.069 | 13811 | 7.43 | -- |
| 295.31 | 0.8 | 6.42 | 1.13 | 2.22 | -2.83 | -- | -- | 0.672 | 9.6 | 1.46 | 15190 | 6.13 | -- |
| 411.67 | 0.945 | 6.45 | 0.423 | -- | -5.43 | -- | -5.61 | 0.779 | -- | 1.33 | 13740 | 11.4 | -- |
| 521.92 | 1.07 | 6.62 | 0.73 | 2.44 | -- | 0.404 | -- | -0.188 | 9.43 | -- | -- | -- | -- |
| 522.52 | 1.07 | 6.62 | 0.744 | 2.44 | -- | -- | -- | -0.187 | 9.42 | -- | -- | -- | -- |
| 436.58 | 0.973 | 6.48 | 1.65 | -- | -4.78 | -- | -- | 0.74 | -- | 1.48 | 13784 | 13.2 | -- |
| 325.24 | 0.84 | 6.42 | -- | 2.15 | -2.7 | -- | -- | 0.634 | 9.22 | 1.49 | 15233 | 7.03 | -- |
| 870.26 | 1.38 | 6.68 | 0.73 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 537.12 | 1.08 | 6.64 | -- | 2.43 | -- | -- | -- | -0.27 | 9.4 | -- | -- | -- | -- |
| 432.04 | 0.968 | 6.53 | -- | -- | -4.24 | -- | -- | 0.469 | -- | 3.11 | 10912 | 13.1 | -- |
| 884.31 | 1.39 | 6.7 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 285.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 286.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 3 | 286.49 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 7 | 287.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 8 | 287.43 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 20 | 287.76 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 21 | 287.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 31 | 287.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 34 | 287.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 37 | 287.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 49 | 288.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 59 | 289.24 | radiation | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 67 | 289.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 84 | 290.14 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 94 | 290.14 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 22 |
| 95 | 290.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 97 | 290.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 102 | 290.26 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 116 | 290.55 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 140 | 290.68 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 143 | 290.72 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 192 | 291.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 319 | 292.20 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 320 | 292.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 371 | 292.26 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 22 |
| 396 | 292.52 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 426 | 292.82 | radiation | 40 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 437 | 293.08 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 451 | 293.21 | radiation | 40 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 459 | 293.38 | radiation | 20 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 489 | 293.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 20 |
| 491 | 293.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 497 | 293.70 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 504 | 293.79 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 511 | 293.89 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 517 | 293.95 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 551 | 294.35 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 566 | 294.38 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 567 | 294.39 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 577 | 294.41 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 712 | 295.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 841 | 296.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 888 | 297.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 973 | 297.91 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 984 | 298.02 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 998 | 298.21 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |