Os02g0184700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0184700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.71 | 0.639 | 3.48 | 1.69 | 0.586 | 3.62 | 2.73 | 8.26 | 0.301 | 7.3 | 0.8408 | 4597 | 5.12 | 2.98 |
| 253.16 | 0.741 | 3.48 | 3.1 | 0.518 | 2.8 | 2.99 | -- | 0.487 | 6.63 | 1.735 | 6168 | 5.12 | 2.95 |
| 200.25 | 0.659 | 3.49 | 1.58 | 0.582 | 3.5 | -- | 8.57 | 0.27 | 6.75 | 0.8795 | 4725 | 5.09 | 2.81 |
| 264.14 | 0.757 | 3.34 | 3.11 | 0.519 | 2.68 | -- | -- | 0.469 | 5.52 | 2.11 | 6329 | 5.3 | 3.04 |
| 216.18 | 0.685 | 3.5 | 1.61 | -- | 3.58 | -- | 8.6 | 0.292 | -- | 0.9741 | 4784 | 4.99 | 2.84 |
| 334.41 | 0.857 | 3.39 | 2.21 | 0.654 | -- | 2.99 | -- | -0.000292 | 7.81 | -- | -- | -- | -- |
| 360.2 | 0.889 | 3.4 | 2.29 | 0.655 | -- | -- | -- | -0.00407 | 7.74 | -- | -- | -- | -- |
| 274.69 | 0.772 | 3.34 | 3.15 | -- | 2.73 | -- | -- | 0.564 | -- | 2.043 | 4793 | 5.35 | 3.03 |
| 392.02 | 0.922 | 3.3 | -- | 1.23 | 2.94 | -- | -- | 0.2 | 5.37 | 11.5 | 8337 | 4.97 | 1.23 |
| 383.36 | 0.915 | 3.41 | 2.29 | -- | -- | -- | -- | 0.00533 | -- | -- | -- | -- | -- |
| 497.82 | 1.04 | 3.45 | -- | 0.674 | -- | -- | -- | -0.259 | 7.5 | -- | -- | -- | -- |
| 359.54 | 0.883 | 3.34 | -- | -- | 2.92 | -- | -- | 0.231 | -- | 12.28 | 20569 | 5.02 | 1.2 |
| 522.09 | 1.07 | 3.47 | -- | -- | -- | -- | -- | -0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 4 | 188.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 12 | 190.12 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 13 | 190.40 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 16 | 190.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 29 | 191.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 30 | 191.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 36 | 192.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 44 | 192.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 56 | 193.35 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 68 | 194.18 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 85 | 194.79 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 7 |
| 88 | 194.88 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 91 | 194.93 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 17 |
| 107 | 195.24 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 145 | 195.51 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 153 | 195.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 158 | 195.58 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 182 | 195.72 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 260 | 196.15 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 285 | 196.29 | humidity | 90.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 291 | 196.30 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 13 |
| 309 | 196.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 11 |
| 316 | 196.42 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 335 | 196.52 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 337 | 196.53 | humidity | 90.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 355 | 196.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 357 | 196.58 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 443 | 196.84 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 446 | 196.84 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 20 |
| 548 | 197.14 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 21 |
| 695 | 197.51 | humidity | 80.0 | 43200 | > th | dose dependent | no | NA | NA |
| 698 | 197.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 699 | 197.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 733 | 197.59 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 763 | 197.64 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 841 | 197.82 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 867 | 197.90 | humidity | 90.0 | 43200 | > th | dose independent | no | NA | NA |
| 876 | 197.93 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 879 | 197.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 886 | 197.94 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 895 | 197.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 897 | 197.96 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 925 | 198.04 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 928 | 198.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 933 | 198.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 945 | 198.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 972 | 198.14 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 7 | NA |