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Os02g0184200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Inorganic H+ pyrophosphatase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.1 (0.0188) R2 : 0.233
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.514 (0.0452) R2dC : 0.218 R2C : 0.216
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.11 (0.0396) R2dN8 : 0.0169 R2N8 : 0.0149
σ : 0.355
deviance : 57.52
__
_____
C
peak time of C : 13.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.57 0.334 14.1 0.0228 0.553 0.687 -0.599 -0.765 -0.067 13.2 20 45 -- --
50.73 0.332 14.1 0.0173 0.549 1.06 -0.565 -- -0.0735 13.2 19.43 59 -- --
51.93 0.336 14.1 -0.00681 0.558 0.798 -- -0.262 -0.0706 13.2 20.17 58 -- --
51.91 0.336 14.1 -0.0133 0.547 1 -- -- -0.0805 13.3 19.38 59 -- --
67.61 0.383 14.1 0.0344 -- 0.613 -- -0.678 -0.0645 -- 19.96 845 -- --
56.05 0.351 14.1 -0.14 0.51 -- -0.451 -- -0.125 13.2 -- -- -- --
56.89 0.353 14.1 -0.156 0.511 -- -- -- -0.128 13.3 -- -- -- --
67.88 0.384 14.1 -0.00611 -- 0.893 -- -- -0.0813 -- 19.1 826 -- --
51.91 0.336 14.1 -- 0.55 1.02 -- -- -0.0777 13.3 19.39 59 -- --
73 0.399 14.1 -0.175 -- -- -- -- -0.138 -- -- -- -- --
57.52 0.355 14.1 -- 0.514 -- -- -- -0.11 13.3 -- -- -- --
67.87 0.384 14.1 -- -- 0.887 -- -- -0.0772 -- 19.13 788 -- --
73.82 0.401 14.1 -- -- -- -- -- -0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.32 wind 9.0 90 < th dose dependent rect. 1 17
3 46.43 temperature 15.0 270 > th dose independent rect. 13 15
4 46.49 temperature 15.0 90 > th dose dependent rect. 24 7
5 46.53 temperature 20.0 90 > th dose independent rect. 1 17
10 46.71 temperature 15.0 270 > th dose dependent rect. 24 4
12 46.76 temperature 15.0 1440 > th dose independent rect. 19 7
15 46.86 temperature 20.0 10 > th dose independent rect. 1 6
16 46.96 temperature 20.0 90 > th dose independent rect. 24 7
24 47.12 temperature 15.0 10 > th dose dependent rect. 1 6
29 47.19 precipitation 0.1 90 < th dose independent rect. 18 7
30 47.19 precipitation 0.1 90 < th dose dependent rect. 18 7
31 47.20 radiation 20.0 4320 < th dose independent rect. 2 4
45 47.44 wind 7.0 90 < th dose independent rect. 18 7
47 47.44 wind 9.0 90 < th dose independent rect. 1 17
52 47.48 precipitation 0.1 90 < th dose independent rect. 1 17
54 47.48 precipitation 0.1 90 < th dose dependent rect. 1 17
56 47.53 radiation 10.0 90 < th dose independent rect. 18 7
58 47.54 temperature 20.0 270 > th dose independent rect. 24 4
60 47.54 temperature 15.0 270 > th dose independent rect. 22 23
63 47.55 temperature 10.0 90 > th dose independent rect. 18 7
64 47.55 humidity 50.0 90 > th dose independent rect. 18 7
69 47.55 atmosphere 1015.0 90 < th dose independent rect. 1 17
70 47.55 radiation 10.0 90 < th dose dependent rect. 18 7
76 47.58 atmosphere 995.0 90 > th dose independent rect. 18 7
77 47.60 atmosphere 1015.0 1440 < th dose independent rect. 2 6
80 47.61 temperature 30.0 10 < th dose independent rect. 18 7
83 47.62 humidity 50.0 10 > th dose dependent rect. 18 7
94 47.70 radiation 1.0 90 < th dose dependent rect. 5 20
102 47.72 temperature 30.0 1440 < th dose independent rect. 19 7
106 47.72 humidity 50.0 1440 > th dose independent rect. 19 7
108 47.72 atmosphere 995.0 1440 > th dose independent rect. 19 7
109 47.72 radiation 1.0 1440 < th dose independent rect. 19 7
129 47.72 temperature 10.0 1440 > th dose independent rect. 2 17
132 47.72 radiation 10.0 1440 < th dose dependent rect. 19 7
143 47.78 humidity 50.0 30 > th dose dependent rect. 8 17
158 47.87 humidity 50.0 90 > th dose independent rect. 7 17
167 47.91 humidity 50.0 10 > th dose independent rect. 8 17
173 47.93 atmosphere 995.0 90 > th dose independent rect. 1 17
186 47.99 wind 1.0 90 > th dose independent rect. 18 7
193 48.03 temperature 10.0 90 > th dose dependent rect. 1 17
203 48.06 temperature 15.0 1440 > th dose independent rect. 22 4
221 48.12 temperature 20.0 270 > th dose independent rect. 1 1
227 48.13 radiation 10.0 30 < th dose independent rect. 1 17
230 48.15 radiation 1.0 90 < th dose independent rect. 5 20
252 48.23 wind 3.0 30 < th dose independent rect. 1 17
270 48.28 temperature 20.0 90 > th dose independent rect. 24 21
271 48.29 precipitation 0.1 270 < th dose independent rect. 16 8
275 48.29 precipitation 0.1 270 < th dose dependent rect. 16 8
287 48.32 wind 9.0 90 < th dose dependent rect. 18 7
299 48.35 radiation 40.0 43200 < th dose dependent rect. 19 7
317 48.37 temperature 10.0 270 > th dose dependent rect. 12 16
328 48.42 wind 1.0 90 > th dose independent rect. 7 17
341 48.44 atmosphere 1010.0 90 < th dose independent rect. 24 7
367 48.49 humidity 50.0 270 > th dose independent rect. 4 9
373 48.50 wind 1.0 270 > th dose independent rect. 16 8
382 48.51 radiation 1.0 90 < th dose dependent rect. 9 16
386 48.52 precipitation 0.1 90 < th dose independent rect. 7 17
387 48.52 wind 9.0 90 < th dose dependent rect. 24 7
390 48.52 precipitation 0.1 90 < th dose dependent rect. 7 17
392 48.53 atmosphere 1015.0 90 < th dose independent rect. 18 7
398 48.54 wind 1.0 10 > th dose independent rect. 7 18
404 48.55 wind 1.0 10 > th dose independent rect. 18 7
424 48.57 radiation 10.0 90 < th dose independent rect. 24 7
431 48.58 wind 9.0 270 < th dose independent rect. 16 8
442 48.60 temperature 30.0 90 < th dose independent rect. 24 7
443 48.60 humidity 50.0 90 > th dose independent rect. 24 7
445 48.60 atmosphere 995.0 90 > th dose independent rect. 24 7
446 48.60 radiation 40.0 90 < th dose independent rect. 24 7
447 48.60 temperature 10.0 90 > th dose independent rect. 7 17
448 48.60 temperature 15.0 1440 > th dose independent rect. 8 17
450 48.60 radiation 40.0 90 < th dose dependent rect. 24 7
452 48.61 wind 9.0 90 < th dose independent rect. 24 7
475 48.64 precipitation 0.1 90 < th dose independent rect. 24 7
477 48.64 precipitation 0.1 90 < th dose dependent rect. 24 7
478 48.65 wind 3.0 30 < th dose independent rect. 1 11
482 48.66 radiation 10.0 10 < th dose independent rect. 1 6
497 48.69 humidity 50.0 270 > th dose independent rect. 16 8
506 48.71 temperature 10.0 270 > th dose independent rect. 16 8
507 48.71 radiation 40.0 270 < th dose independent rect. 16 8
518 48.72 wind 9.0 10 < th dose dependent rect. 1 7
524 48.73 radiation 1.0 90 < th dose independent rect. 9 16
530 48.74 radiation 10.0 10 < th dose independent rect. 1 11
532 48.74 wind 1.0 270 > th dose independent rect. 4 20
538 48.75 wind 5.0 30 < th dose dependent rect. 1 11
543 48.76 atmosphere 1000.0 270 > th dose independent rect. 13 15
545 48.76 radiation 40.0 270 < th dose dependent rect. 16 8
551 48.77 radiation 10.0 90 < th dose independent rect. 24 9
584 48.81 humidity 50.0 90 > th dose dependent rect. 24 7
603 48.84 humidity 50.0 270 > th dose independent rect. 4 20
613 48.86 radiation 10.0 10 < th dose independent rect. 1 9
614 48.86 wind 9.0 90 < th dose independent rect. 7 17
621 48.87 wind 3.0 30 < th dose independent rect. 1 15
627 48.88 precipitation 0.1 10 < th dose independent rect. 8 17
628 48.88 precipitation 0.1 270 < th dose independent rect. 4 20
630 48.88 precipitation 0.1 10 < th dose dependent rect. 8 17
631 48.88 precipitation 0.1 270 < th dose dependent rect. 4 20
637 48.89 radiation 40.0 10 < th dose dependent rect. 1 7
640 48.89 radiation 20.0 10 < th dose dependent rect. 1 17
642 48.90 temperature 10.0 270 > th dose independent rect. 4 9
643 48.90 atmosphere 995.0 270 > th dose independent rect. 4 9
644 48.90 atmosphere 1015.0 270 < th dose independent rect. 4 9
686 48.93 atmosphere 995.0 90 > th dose independent rect. 7 17
734 48.98 precipitation 0.1 270 < th dose independent rect. 24 4
735 48.98 temperature 15.0 270 > th dose independent rect. 9 22
736 48.98 wind 9.0 270 < th dose dependent rect. 24 4
737 48.98 precipitation 0.1 270 < th dose dependent rect. 24 4
809 49.03 atmosphere 1010.0 270 < th dose independent rect. 24 4
816 49.04 wind 9.0 270 < th dose independent rect. 24 4
819 49.04 temperature 30.0 270 < th dose independent rect. 24 4
820 49.04 humidity 50.0 270 > th dose independent rect. 24 4
823 49.04 atmosphere 995.0 270 > th dose independent rect. 24 4
825 49.04 radiation 1.0 270 < th dose independent rect. 24 4
836 49.04 temperature 10.0 270 > th dose independent rect. 4 20
837 49.04 radiation 1.0 270 < th dose dependent rect. 24 4
860 49.07 wind 9.0 10 < th dose independent rect. 1 7
861 49.07 temperature 10.0 10 > th dose independent rect. 1 7
863 49.07 temperature 30.0 10 < th dose independent rect. 1 7
864 49.07 humidity 50.0 10 > th dose independent rect. 1 7
866 49.07 atmosphere 995.0 10 > th dose independent rect. 1 7
867 49.07 atmosphere 1015.0 10 < th dose independent rect. 1 7
869 49.07 precipitation 0.1 270 < th dose independent rect. 4 9
870 49.07 temperature 10.0 10 > th dose independent rect. 8 17
874 49.07 precipitation 0.1 270 < th dose dependent rect. 4 9
881 49.08 wind 3.0 90 < th dose independent rect. 24 7
899 49.10 wind 9.0 270 < th dose independent rect. 4 20
922 49.12 wind 9.0 270 < th dose independent rect. 4 9
933 49.12 radiation 20.0 30 < th dose dependent rect. 1 9
939 49.13 radiation 40.0 10 < th dose independent rect. 1 7
941 49.13 radiation 10.0 10 < th dose independent rect. 1 15
962 49.14 atmosphere 1015.0 90 < th dose independent rect. 7 17