FiT-DB / Search/ Help/ Sample detail

Os02g0182700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0189) R2 : 0.598
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.1 (0.0452) R2dC : 0.523 R2C : 0.492
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.385 (0.0399) R2dN8 : 0.106 R2N8 : 0.075
σ : 0.357
deviance : 58.33
__
_____
C
peak time of C : 0.644
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.74 0.296 11.3 -0.654 1.1 -0.45 -0.0523 -0.238 -0.598 0.668 63.92 7201 -- --
39.79 0.294 11.3 -0.691 1.1 -0.468 -0.0332 -- -0.626 0.643 66.79 7190 -- --
39.74 0.294 11.3 -0.653 1.1 -0.452 -- -0.222 -0.597 0.66 65.12 7182 -- --
39.78 0.294 11.3 -0.684 1.1 -0.459 -- -- -0.62 0.673 66.98 7153 -- --
82.18 0.425 11.2 -0.732 -- 0.821 -- -0.259 -0.399 -- 65.12 7182 -- --
43.43 0.309 11.3 -0.753 1.11 -- -0.0253 -- -0.468 0.678 -- -- -- --
43.44 0.309 11.3 -0.752 1.11 -- -- -- -0.468 0.676 -- -- -- --
82.41 0.425 11.2 -0.741 -- 0.814 -- -- -0.401 -- 65.12 7182 -- --
51.7 0.335 11.3 -- 1.09 -0.606 -- -- -0.599 0.626 67.88 7135 -- --
120.58 0.513 11.3 -0.712 -- -- -- -- -0.449 -- -- -- -- --
58.33 0.357 11.3 -- 1.1 -- -- -- -0.385 0.644 -- -- -- --
96.9 0.46 11.2 -- -- 0.802 -- -- -0.319 -- 65.12 7182 -- --
133.95 0.54 11.2 -- -- -- -- -- -0.37 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.55 wind 5.0 4320 > th dose dependent rect. 14 1
2 38.65 humidity 90.0 4320 > th dose dependent rect. 6 4
3 38.67 humidity 90.0 4320 > th dose dependent rect. 7 2
9 38.91 humidity 80.0 4320 < th dose independent rect. 20 3
10 39.02 humidity 70.0 4320 > th dose independent rect. 15 1
13 39.08 humidity 80.0 4320 > th dose independent rect. 21 2
14 39.09 humidity 70.0 4320 < th dose independent rect. 15 1
15 39.10 wind 7.0 4320 > th dose independent rect. 14 1
18 39.13 precipitation 0.1 4320 > th dose dependent rect. 23 9
19 39.14 wind 7.0 4320 < th dose independent rect. 14 1
20 39.14 radiation 1.0 4320 < th dose dependent rect. 7 1
22 39.14 temperature 25.0 90 > th dose dependent rect. 21 10
25 39.17 humidity 80.0 4320 > th dose independent rect. 18 6
33 39.22 humidity 80.0 4320 > th dose independent rect. 20 4
34 39.22 humidity 80.0 4320 < th dose independent rect. 18 5
47 39.26 precipitation 0.1 4320 > th dose independent rect. 24 8
55 39.29 precipitation 0.1 4320 < th dose independent rect. 1 7
56 39.29 wind 1.0 14400 > th dose dependent rect. 23 3
58 39.29 precipitation 0.1 4320 < th dose dependent rect. 1 7
67 39.32 precipitation 0.1 14400 > th dose dependent rect. 3 1
74 39.34 humidity 90.0 720 > th dose dependent sin 1 NA
76 39.34 temperature 25.0 30 > th dose dependent rect. 18 14
77 39.35 humidity 90.0 14400 > th dose independent rect. 7 1
82 39.35 wind 3.0 14400 < th dose dependent rect. 1 2
86 39.35 humidity 90.0 720 > th dose dependent rect. 4 10
92 39.37 precipitation 0.1 14400 > th dose independent rect. 19 1
99 39.38 precipitation 0.1 4320 > th dose dependent rect. 23 15
101 39.39 humidity 90.0 720 > th dose dependent rect. 4 6
104 39.39 precipitation 0.1 14400 > th dose dependent rect. 3 11
105 39.40 humidity 80.0 14400 < th dose independent rect. 10 1
106 39.40 precipitation 0.1 4320 > th dose independent rect. 3 5
113 39.41 precipitation 0.1 4320 > th dose dependent sin 6 NA
114 39.41 humidity 90.0 720 > th dose dependent rect. 4 13
115 39.41 precipitation 0.1 4320 > th dose dependent rect. 1 13
117 39.42 radiation 1.0 4320 < th dose independent rect. 7 1
125 39.42 wind 3.0 14400 < th dose dependent rect. 23 4
130 39.42 precipitation 0.1 14400 > th dose dependent rect. 3 14
131 39.42 precipitation 0.1 4320 > th dose dependent rect. 23 17
132 39.43 humidity 80.0 14400 > th dose independent rect. 10 1
133 39.43 precipitation 0.1 14400 < th dose independent rect. 19 1
137 39.43 precipitation 0.1 14400 < th dose dependent rect. 19 1
148 39.44 wind 1.0 1440 < th dose independent rect. 13 6
156 39.45 radiation 1.0 4320 > th dose independent rect. 7 1
166 39.46 humidity 90.0 4320 < th dose independent rect. 6 2
169 39.46 precipitation 0.1 14400 > th dose dependent rect. 17 1
206 39.49 radiation 10.0 30 < th dose independent rect. 22 10
218 39.50 humidity 80.0 14400 > th dose dependent rect. 13 1
224 39.51 humidity 90.0 4320 > th dose independent rect. 6 3
247 39.53 precipitation 0.1 14400 > th dose dependent rect. 19 1
255 39.54 precipitation 0.1 4320 < th dose independent rect. 1 13
260 39.54 precipitation 0.1 4320 < th dose dependent rect. 1 13
263 39.55 precipitation 0.1 4320 > th dose independent rect. 1 13
264 39.55 precipitation 0.1 4320 > th dose independent rect. 23 15
266 39.55 wind 5.0 4320 > th dose dependent rect. 13 8
269 39.56 precipitation 0.1 4320 > th dose independent sin 6 NA
275 39.56 radiation 1.0 4320 < th dose dependent rect. 7 4
279 39.56 wind 1.0 1440 < th dose dependent rect. 12 7
281 39.56 temperature 25.0 10 < th dose dependent rect. 13 9
282 39.56 atmosphere 995.0 30 > th dose dependent rect. 22 9
286 39.57 precipitation 0.1 4320 < th dose independent sin 6 NA
287 39.57 wind 3.0 14400 < th dose independent rect. 23 2
297 39.57 precipitation 0.1 4320 < th dose dependent sin 6 NA
304 39.58 precipitation 0.1 14400 > th dose independent rect. 4 1
305 39.58 precipitation 0.1 14400 > th dose independent rect. 17 1
325 39.59 precipitation 0.1 4320 > th dose independent rect. 23 18
363 39.62 precipitation 0.1 4320 > th dose independent rect. 7 1
369 39.62 precipitation 0.1 4320 < th dose independent rect. 22 19
370 39.62 precipitation 0.1 4320 > th dose dependent rect. 7 1
376 39.62 precipitation 0.1 4320 < th dose dependent rect. 22 19
390 39.63 humidity 70.0 14400 > th dose dependent rect. 7 1
411 39.65 precipitation 0.1 14400 < th dose independent rect. 3 1
424 39.65 precipitation 0.1 14400 < th dose dependent rect. 3 1
455 39.67 temperature 25.0 10 < th dose dependent rect. 8 14
460 39.68 radiation 1.0 4320 > th dose independent rect. 7 5
461 39.68 wind 1.0 43200 > th dose independent rect. 1 6
462 39.68 wind 5.0 4320 > th dose independent rect. 9 9
465 39.68 atmosphere 1000.0 30 > th dose independent rect. 22 18
467 39.68 humidity 80.0 4320 < th dose dependent rect. 20 3
475 39.69 wind 1.0 1440 > th dose independent rect. 13 6
476 39.69 humidity 70.0 4320 < th dose independent rect. 11 6
533 39.73 radiation 1.0 4320 < th dose independent rect. 7 5
535 39.73 atmosphere 1000.0 10 > th dose independent rect. 22 10
543 39.73 precipitation 0.1 4320 > th dose dependent rect. 19 13
549 39.74 wind 5.0 4320 < th dose independent rect. 9 9
550 39.74 wind 5.0 4320 > th dose independent rect. 6 12
572 39.75 wind 5.0 4320 > th dose independent rect. 4 14
574 39.75 humidity 80.0 14400 > th dose independent rect. 21 20
598 39.76 wind 5.0 4320 < th dose independent rect. 6 12
599 39.76 humidity 80.0 4320 < th dose independent rect. 9 15
603 39.76 wind 5.0 30 < th dose independent rect. 22 21
604 39.76 radiation 10.0 14400 < th dose dependent rect. 23 1
605 39.76 wind 1.0 1440 < th dose dependent rect. 12 2
615 39.77 humidity 70.0 4320 < th dose independent rect. 12 1
617 39.77 precipitation 0.1 1440 < th dose independent rect. 5 7
631 39.77 precipitation 0.1 1440 < th dose dependent rect. 5 7
636 39.78 wind 1.0 1440 < th dose independent rect. 13 1
651 39.78 wind 5.0 4320 > th dose independent rect. 24 18
656 39.78 precipitation 0.1 4320 > th dose dependent rect. 19 11
676 39.79 humidity 80.0 14400 > th dose independent rect. 9 15
679 39.79 humidity 80.0 4320 < th dose dependent rect. 21 1
690 39.80 wind 3.0 14400 > th dose independent rect. 23 2
693 39.80 humidity 80.0 14400 > th dose independent rect. 9 7
702 39.80 wind 5.0 4320 < th dose independent rect. 4 14
706 39.80 wind 5.0 4320 < th dose independent rect. 24 18
722 39.81 wind 5.0 4320 > th dose independent sin 22 NA
725 39.81 temperature 25.0 90 < th dose independent rect. 12 10
749 39.82 temperature 25.0 10 < th dose independent rect. 13 9
774 39.83 precipitation 0.1 14400 < th dose independent rect. 17 1
778 39.83 wind 3.0 14400 > th dose independent rect. 22 4
781 39.83 wind 1.0 43200 < th dose independent rect. 1 6
791 39.83 precipitation 0.1 14400 < th dose dependent rect. 17 1
795 39.83 humidity 70.0 14400 > th dose dependent rect. 7 8
799 39.84 wind 5.0 4320 < th dose independent sin 22 NA
808 39.84 wind 1.0 1440 < th dose independent rect. 10 9
823 39.84 wind 5.0 4320 > th dose dependent rect. 13 12
910 39.88 precipitation 0.1 4320 < th dose independent rect. 7 1
923 39.88 precipitation 0.1 4320 < th dose dependent rect. 7 1
969 39.90 humidity 70.0 4320 > th dose independent rect. 11 6
977 39.90 humidity 80.0 14400 < th dose independent rect. 7 8
985 39.90 humidity 80.0 14400 > th dose independent rect. 7 17
988 39.90 humidity 80.0 4320 > th dose independent rect. 18 18