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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0180900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.28 (0.024) R2 : 0.00342
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0631 (0.0504) R2dN8 : 0.00442 R2N8 : 0.00342
σ : 0.451
deviance : 93.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.48 0.437 3.29 -0.0401 0.196 -0.288 -0.295 1.79 0.0447 6.87 1 16 -- --
89.17 0.443 3.27 0.0374 0.221 -0.124 -0.427 -- 0.0641 6.44 1.1 16 -- --
86.7 0.434 3.29 -0.0467 0.195 -0.292 -- 1.83 0.0452 7 1.033 16 -- --
89.58 0.441 3.27 0.0276 0.215 -0.153 -- -- 0.0653 6.85 1.053 16 -- --
88.53 0.438 3.3 -0.0577 -- -0.379 -- 1.95 0.0476 -- 1.037 16 -- --
89.67 0.444 3.27 0.0503 0.251 -- -0.42 -- 0.062 6.23 -- -- -- --
90.09 0.444 3.27 0.046 0.25 -- -- -- 0.0637 6.46 -- -- -- --
91.3 0.445 3.27 -0.0246 -- -0.175 -- -- 0.0738 -- 2.019 18 -- --
89.6 0.441 3.27 -- 0.215 -0.157 -- -- 0.0623 6.86 1.049 16 -- --
93.33 0.451 3.27 0.0524 -- -- -- -- 0.0689 -- -- -- -- --
90.14 0.444 3.27 -- 0.25 -- -- -- 0.0586 6.45 -- -- -- --
91.23 0.445 3.27 -- -- -0.179 -- -- 0.067 -- 2 40 -- --
93.4 0.451 3.28 -- -- -- -- -- 0.0631 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.16 temperature 25.0 90 > th dose dependent rect. 2 2
2 72.21 temperature 25.0 90 > th dose independent rect. 1 3
3 72.76 temperature 25.0 90 > th dose dependent rect. 1 4
5 73.47 temperature 25.0 270 > th dose independent rect. 2 1
14 74.92 atmosphere 1005.0 30 > th dose dependent rect. 2 1
15 74.98 atmosphere 1005.0 30 > th dose independent rect. 2 1
21 75.15 wind 3.0 30 < th dose independent rect. 2 1
23 75.16 wind 3.0 30 < th dose dependent rect. 2 1
31 75.29 temperature 25.0 30 < th dose independent rect. 2 1
33 75.30 temperature 10.0 30 > th dose independent rect. 2 1
36 75.30 humidity 50.0 30 > th dose independent rect. 2 1
40 75.30 atmosphere 1010.0 30 < th dose independent rect. 2 1
42 75.30 radiation 1.0 30 < th dose independent rect. 2 1
47 75.30 precipitation 0.1 30 < th dose independent rect. 2 1
48 75.30 temperature 10.0 30 > th dose independent rect. 3 23
49 75.30 radiation 1.0 30 < th dose dependent rect. 2 1
54 75.30 precipitation 0.1 30 < th dose dependent rect. 2 1
55 75.33 humidity 50.0 30 > th dose dependent rect. 2 1
63 75.46 radiation 10.0 43200 < th dose dependent rect. 3 1
65 75.48 radiation 1.0 4320 < th dose dependent rect. 3 1
79 75.64 wind 9.0 1440 < th dose independent rect. 3 1
80 75.64 temperature 10.0 1440 > th dose independent rect. 3 1
83 75.64 temperature 30.0 1440 < th dose independent rect. 3 1
87 75.64 humidity 50.0 1440 > th dose independent rect. 3 1
96 75.64 atmosphere 995.0 1440 > th dose independent rect. 3 1
97 75.64 radiation 1.0 1440 < th dose independent rect. 3 1
117 75.64 temperature 10.0 1440 > th dose independent rect. 4 23
125 75.65 atmosphere 1005.0 10 > th dose dependent rect. 2 3
129 75.78 temperature 30.0 30 < th dose dependent rect. 2 1
130 75.81 atmosphere 1015.0 30 < th dose dependent rect. 2 1
134 76.16 wind 1.0 30 > th dose independent rect. 2 1
137 76.31 atmosphere 1000.0 30 > th dose independent rect. 3 23
203 77.72 precipitation 0.1 30 < th dose independent rect. 3 23
204 77.72 precipitation 0.1 30 < th dose dependent rect. 3 23
205 77.75 wind 9.0 30 < th dose independent rect. 3 23
242 79.98 humidity 50.0 30 > th dose independent rect. 3 23
250 80.15 temperature 25.0 1440 < th dose independent rect. 1 1
264 80.78 atmosphere 1005.0 30 > th dose independent rect. 2 3
302 81.82 wind 3.0 30 < th dose dependent rect. 2 3
341 82.13 humidity 90.0 90 < th dose independent rect. 2 1
376 82.78 atmosphere 1000.0 30 > th dose independent rect. 5 21
385 82.91 temperature 30.0 30 < th dose independent rect. 3 23
392 83.02 wind 3.0 30 < th dose independent rect. 2 3
402 83.21 temperature 20.0 10 > th dose independent rect. 2 3
410 83.27 humidity 90.0 90 < th dose independent rect. 1 4
454 83.71 precipitation 0.1 30 < th dose independent rect. 2 3
455 83.71 precipitation 0.1 30 < th dose dependent rect. 2 3
470 83.79 temperature 10.0 30 > th dose independent rect. 2 3
472 83.79 temperature 30.0 30 < th dose independent rect. 2 3
473 83.79 humidity 50.0 30 > th dose independent rect. 2 3
476 83.79 atmosphere 995.0 30 > th dose independent rect. 2 3
478 83.79 atmosphere 1010.0 30 < th dose independent rect. 2 3
480 83.79 radiation 1.0 30 < th dose independent rect. 2 3
485 83.79 temperature 10.0 30 > th dose independent rect. 5 21
486 83.79 radiation 10.0 30 < th dose dependent rect. 2 3
492 83.82 wind 9.0 30 < th dose independent rect. 5 21
505 83.87 precipitation 0.1 30 < th dose independent rect. 5 21
507 83.87 precipitation 0.1 30 < th dose dependent rect. 5 21
529 83.93 humidity 50.0 30 > th dose independent rect. 5 21
540 83.96 wind 9.0 1440 < th dose independent rect. 3 3
541 83.96 temperature 10.0 1440 > th dose independent rect. 3 3
544 83.96 temperature 30.0 1440 < th dose independent rect. 3 3
548 83.96 humidity 50.0 1440 > th dose independent rect. 3 3
557 83.96 atmosphere 995.0 1440 > th dose independent rect. 3 3
558 83.96 radiation 20.0 1440 < th dose independent rect. 3 3
568 83.96 temperature 10.0 1440 > th dose independent rect. 6 21
588 84.08 humidity 80.0 4320 < th dose dependent rect. 1 1
618 84.35 radiation 1.0 10 < th dose dependent rect. 2 12
628 84.39 wind 1.0 10 > th dose independent rect. 5 23
629 84.39 atmosphere 1015.0 30 < th dose independent rect. 3 23
633 84.42 radiation 1.0 10 < th dose independent rect. 2 12
651 84.52 humidity 50.0 30 > th dose dependent rect. 2 3
662 84.59 temperature 25.0 720 < th dose independent rect. 21 5
667 84.61 radiation 1.0 10 < th dose dependent rect. 2 6
690 84.67 atmosphere 1000.0 10 > th dose independent rect. 16 10
696 84.68 radiation 1.0 10 < th dose independent rect. 2 6
740 84.82 temperature 30.0 30 < th dose independent rect. 5 21
747 84.85 wind 1.0 10 < th dose independent rect. 13 14
750 84.86 wind 1.0 30 < th dose independent rect. 21 6
755 84.86 wind 1.0 30 > th dose independent rect. 5 21
805 85.00 atmosphere 995.0 30 > th dose dependent rect. 5 21
830 85.06 wind 1.0 30 < th dose independent rect. 7 20
853 85.10 radiation 40.0 10 < th dose dependent rect. 14 12
857 85.12 radiation 10.0 10 < th dose independent rect. 16 10
858 85.12 radiation 10.0 10 < th dose independent rect. 14 12
870 85.16 radiation 20.0 10 < th dose dependent rect. 5 21
880 85.20 atmosphere 995.0 30 > th dose dependent rect. 3 23
887 85.23 humidity 80.0 4320 < th dose independent rect. 1 1
897 85.25 temperature 10.0 30 > th dose dependent rect. 5 21
899 85.26 wind 9.0 10 < th dose independent rect. 16 10
902 85.26 radiation 30.0 10 < th dose dependent rect. 16 10
905 85.27 atmosphere 1000.0 10 > th dose independent rect. 14 12
910 85.28 humidity 50.0 30 > th dose dependent rect. 3 23
919 85.31 radiation 10.0 10 < th dose independent rect. 5 21
920 85.31 wind 9.0 720 < th dose dependent rect. 2 1
923 85.32 precipitation 0.1 10 < th dose independent rect. 2 14
926 85.32 precipitation 0.1 10 < th dose dependent rect. 2 14
934 85.36 humidity 90.0 10 < th dose dependent rect. 4 1
943 85.38 radiation 30.0 10 < th dose independent rect. 16 10
944 85.38 radiation 40.0 10 < th dose dependent rect. 3 23
951 85.40 humidity 90.0 10 < th dose independent rect. 3 2
957 85.41 temperature 10.0 10 > th dose independent rect. 16 10
960 85.41 temperature 10.0 10 > th dose independent rect. 2 14
962 85.41 atmosphere 1015.0 10 < th dose independent rect. 2 14
979 85.45 humidity 50.0 10 > th dose independent rect. 16 10
983 85.46 precipitation 0.1 10 < th dose independent rect. 16 10
984 85.46 precipitation 0.1 10 < th dose dependent rect. 16 10
991 85.48 atmosphere 1015.0 30 < th dose independent rect. 5 21