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Os02g0180700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.027) R2 : 0.26
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.881 (0.0703) R2dC : 0.256 R2C : 0.256
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.077 (0.0569) R2dN8 : 0.00384 R2N8 : 0.00384
σ : 0.51
deviance : 118.67
__
_____
C
peak time of C : 5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.69 0.457 10.4 -0.318 0.827 0.553 0.499 0.902 0.168 5.29 29.71 1217 -- --
94.8 0.453 10.4 -0.466 0.816 0.646 0.551 -- 0.188 5.3 29.9 1224 -- --
95.29 0.455 10.4 -0.306 0.83 0.551 -- 0.988 0.171 5.36 29.7 1223 -- --
95.34 0.455 10.4 -0.477 0.832 0.662 -- -- 0.172 5.37 29.7 1224 -- --
130.8 0.533 10.4 -0.167 -- 0.546 -- 1.7 0.213 -- 29.6 1242 -- --
115.04 0.503 10.5 -0.297 0.88 -- 0.714 -- 0.0471 4.88 -- -- -- --
116.32 0.505 10.5 -0.299 0.887 -- -- -- 0.0437 4.99 -- -- -- --
131.12 0.533 10.5 -0.468 -- 0.73 -- -- 0.199 -- 29.7 1246 -- --
100.99 0.468 10.4 -- 0.833 0.594 -- -- 0.206 5.36 30.2 1198 -- --
157.67 0.587 10.5 -0.266 -- -- -- -- 0.0664 -- -- -- -- --
118.67 0.51 10.5 -- 0.881 -- -- -- 0.077 5 -- -- -- --
136.62 0.544 10.5 -- -- 0.67 -- -- 0.235 -- 30.1 1231 -- --
159.54 0.59 10.5 -- -- -- -- -- 0.096 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.71 wind 7.0 270 < th dose independent rect. 6 19
2 88.80 wind 5.0 270 < th dose independent rect. 18 7
10 89.86 wind 9.0 270 < th dose dependent rect. 6 18
17 90.50 wind 9.0 270 < th dose dependent rect. 18 7
18 90.58 wind 5.0 90 < th dose independent rect. 9 18
24 90.85 wind 5.0 90 < th dose independent rect. 21 6
26 90.86 wind 1.0 90 > th dose dependent rect. 12 10
36 91.35 humidity 60.0 270 > th dose dependent rect. 1 5
39 91.44 wind 9.0 270 < th dose dependent rect. 9 15
55 91.78 temperature 30.0 270 < th dose independent rect. 18 7
56 91.82 wind 9.0 270 < th dose independent rect. 5 9
57 91.83 radiation 1.0 270 < th dose dependent rect. 18 7
59 91.88 humidity 60.0 270 > th dose independent rect. 18 7
62 91.91 temperature 15.0 270 > th dose independent rect. 14 15
63 91.92 temperature 10.0 270 > th dose dependent rect. 1 5
69 91.98 precipitation 0.1 270 < th dose independent rect. 6 19
70 91.98 precipitation 0.1 270 < th dose dependent rect. 6 19
71 91.99 precipitation 0.1 270 < th dose independent rect. 18 7
74 91.99 precipitation 0.1 270 < th dose dependent rect. 18 7
76 92.07 radiation 1.0 270 < th dose independent rect. 18 7
78 92.10 wind 9.0 90 < th dose dependent rect. 9 18
86 92.25 temperature 10.0 270 > th dose independent rect. 5 9
87 92.25 atmosphere 995.0 270 > th dose independent rect. 5 9
88 92.25 atmosphere 1015.0 270 < th dose independent rect. 5 9
101 92.36 precipitation 0.1 270 < th dose independent rect. 1 5
102 92.36 precipitation 0.1 270 < th dose dependent rect. 1 5
104 92.38 wind 3.0 43200 > th dose independent rect. 2 2
111 92.43 wind 9.0 270 < th dose dependent rect. 1 5
113 92.45 wind 3.0 43200 < th dose independent rect. 2 2
115 92.48 precipitation 0.1 270 < th dose independent rect. 5 9
116 92.48 precipitation 0.1 270 < th dose dependent rect. 5 9
126 92.56 temperature 10.0 270 > th dose independent rect. 18 7
128 92.56 radiation 20.0 270 < th dose independent rect. 18 7
131 92.56 temperature 10.0 270 > th dose independent rect. 1 17
132 92.56 atmosphere 1015.0 270 < th dose independent rect. 1 17
141 92.60 atmosphere 995.0 270 > th dose independent rect. 18 7
163 92.67 wind 9.0 270 < th dose dependent rect. 11 13
164 92.69 radiation 10.0 270 < th dose independent rect. 1 5
169 92.72 radiation 1.0 4320 > th dose independent rect. 18 14
173 92.73 wind 5.0 90 < th dose independent rect. 11 16
183 92.83 humidity 60.0 4320 < th dose dependent rect. 16 3
201 92.89 temperature 10.0 270 > th dose independent rect. 1 5
203 92.89 temperature 30.0 270 < th dose independent rect. 1 5
204 92.89 humidity 50.0 270 > th dose independent rect. 1 5
207 92.89 atmosphere 995.0 270 > th dose independent rect. 1 5
208 92.89 atmosphere 1015.0 270 < th dose independent rect. 1 5
212 92.89 temperature 10.0 270 > th dose independent rect. 6 19
213 92.90 wind 9.0 270 < th dose independent rect. 1 5
214 92.90 radiation 30.0 270 < th dose dependent rect. 1 5
224 92.96 radiation 10.0 1440 < th dose independent rect. 17 1
229 93.01 precipitation 0.1 270 < th dose independent rect. 1 17
231 93.01 precipitation 0.1 270 < th dose dependent rect. 1 17
239 93.08 radiation 10.0 1440 > th dose independent rect. 17 1
257 93.15 wind 5.0 90 < th dose independent rect. 13 14
288 93.29 precipitation 0.1 90 < th dose independent rect. 21 6
289 93.29 temperature 30.0 4320 > th dose dependent rect. 17 2
294 93.29 precipitation 0.1 90 < th dose dependent rect. 21 6
304 93.30 radiation 10.0 1440 < th dose independent rect. 17 11
307 93.32 radiation 1.0 4320 < th dose independent rect. 18 14
310 93.33 humidity 50.0 270 > th dose dependent rect. 18 7
312 93.34 radiation 40.0 270 < th dose independent rect. 15 14
315 93.35 wind 9.0 90 < th dose dependent rect. 21 6
318 93.36 wind 5.0 270 < th dose independent rect. 11 13
322 93.37 humidity 50.0 4320 < th dose dependent rect. 16 19
323 93.39 humidity 70.0 14400 < th dose independent rect. 18 1
325 93.40 temperature 10.0 90 > th dose independent rect. 21 6
326 93.40 temperature 30.0 90 < th dose independent rect. 21 6
327 93.40 humidity 50.0 90 > th dose independent rect. 21 6
330 93.40 atmosphere 995.0 90 > th dose independent rect. 21 6
331 93.40 radiation 1.0 90 < th dose independent rect. 21 6
336 93.40 temperature 10.0 90 > th dose independent rect. 3 18
337 93.40 atmosphere 1015.0 90 < th dose independent rect. 3 18
339 93.40 radiation 1.0 90 < th dose dependent rect. 21 6
347 93.43 wind 1.0 43200 > th dose dependent rect. 24 7
349 93.44 humidity 50.0 4320 > th dose independent rect. 16 18
376 93.52 wind 1.0 43200 > th dose dependent rect. 2 5
410 93.56 humidity 50.0 4320 > th dose independent rect. 15 2
411 93.56 humidity 50.0 4320 < th dose independent rect. 16 18
418 93.59 humidity 50.0 4320 < th dose independent rect. 16 1
441 93.62 wind 9.0 43200 < th dose dependent rect. 24 7
443 93.63 wind 9.0 270 < th dose dependent rect. 21 2
444 93.63 radiation 1.0 270 < th dose dependent rect. 15 10
447 93.65 radiation 10.0 1440 > th dose dependent rect. 17 1
462 93.67 radiation 10.0 1440 < th dose independent rect. 17 3
529 93.79 humidity 50.0 4320 > th dose independent rect. 16 4
546 93.80 humidity 50.0 4320 > th dose independent rect. 16 12
557 93.84 humidity 50.0 4320 > th dose independent rect. 16 9
577 93.90 wind 3.0 270 > th dose independent rect. 11 9
587 93.96 humidity 70.0 14400 < th dose independent rect. 18 4
600 93.96 radiation 1.0 270 < th dose dependent rect. 5 20
613 93.98 radiation 40.0 1440 > th dose independent rect. 14 19
619 93.99 radiation 20.0 14400 > th dose dependent rect. 16 2
648 94.04 wind 3.0 43200 < th dose independent rect. 4 1
649 94.04 atmosphere 1015.0 270 < th dose dependent rect. 1 4
714 94.09 atmosphere 995.0 270 > th dose independent rect. 6 19
716 94.09 wind 1.0 43200 > th dose dependent rect. 23 13
722 94.10 radiation 1.0 270 < th dose dependent rect. 7 18
725 94.11 wind 9.0 270 < th dose independent rect. 14 15
732 94.13 wind 3.0 90 < th dose dependent rect. 3 4
742 94.16 wind 9.0 43200 < th dose dependent rect. 23 13
751 94.18 radiation 1.0 270 < th dose dependent rect. 1 11
754 94.19 radiation 40.0 1440 < th dose independent rect. 14 19
758 94.19 radiation 1.0 270 < th dose dependent rect. 1 9
767 94.21 wind 9.0 270 < th dose independent rect. 1 18
898 94.39 radiation 30.0 1440 > th dose dependent rect. 14 19
904 94.42 radiation 40.0 1440 < th dose independent rect. 14 1
937 94.48 temperature 30.0 4320 > th dose independent rect. 18 1
962 94.49 wind 3.0 30 < th dose dependent rect. 3 6
979 94.50 radiation 1.0 270 < th dose independent rect. 1 11