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Os02g0178100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CCT domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.3 (0.0226) R2 : 0.796
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.13 (0.0548) R2dC : 0.694 R2C : 0.744
β3 : -0.668 (0.0646) R2dE : 0.0487 R2E : 0.0968
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.115 (0.0475) R2dN8 : 0.00338 R2N8 : -0.000402
σ : 0.424
deviance : 82.96
__
_____
C
peak time of C : 10.8
E
wheather : temperature
threshold : 26.42
memory length : 2687
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.58 0.406 14.3 0.681 2.13 -0.833 0.59 0.691 0.21 10.8 26.3 2725 -- --
74.68 0.402 14.3 0.507 2.11 -0.752 0.563 -- 0.187 10.8 26.1 2701 -- --
75.98 0.406 14.3 0.63 2.12 -0.809 -- 0.367 0.203 10.8 26.19 2690 -- --
76 0.406 14.3 0.536 2.12 -0.778 -- -- 0.188 10.7 26 2676 -- --
308.93 0.819 14.4 0.891 -- -1.22 -- -0.346 0.206 -- 24.1 902 -- --
98.18 0.465 14.3 0.252 2.22 -- 0.679 -- 0.154 10.9 -- -- -- --
100.11 0.469 14.3 0.279 2.22 -- -- -- 0.156 10.9 -- -- -- --
281.85 0.782 14.3 0.753 -- -2.07 -- -- 0.367 -- 24.28 884 -- --
82.96 0.424 14.3 -- 2.13 -0.668 -- -- 0.115 10.8 26.42 2687 -- --
405.07 0.94 14.3 0.233 -- -- -- -- 0.141 -- -- -- -- --
102.17 0.473 14.3 -- 2.22 -- -- -- 0.125 10.9 -- -- -- --
296.11 0.801 14.3 -- -- -1.91 -- -- 0.262 -- 24.4 880 -- --
406.5 0.941 14.3 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.76 temperature 20.0 720 > th dose dependent rect. 18 1
6 60.84 temperature 25.0 720 > th dose independent rect. 18 1
7 60.96 radiation 1.0 43200 < th dose dependent rect. 19 3
20 63.48 temperature 10.0 270 > th dose dependent rect. 16 13
23 64.71 temperature 15.0 30 > th dose dependent rect. 18 12
31 65.46 humidity 70.0 720 > th dose independent rect. 19 14
43 66.27 humidity 70.0 720 > th dose independent rect. 19 5
96 68.77 temperature 30.0 720 < th dose dependent rect. 19 3
111 69.36 temperature 30.0 720 < th dose dependent rect. 21 1
122 69.55 temperature 10.0 720 > th dose dependent rect. 16 9
137 70.14 temperature 30.0 4320 < th dose independent rect. 18 6
142 70.19 temperature 30.0 90 < th dose dependent rect. 21 6
152 70.56 temperature 30.0 4320 < th dose independent rect. 18 2
160 70.71 wind 1.0 270 > th dose independent rect. 4 11
161 70.71 temperature 30.0 4320 > th dose dependent rect. 18 1
185 70.99 temperature 30.0 4320 < th dose independent rect. 18 11
189 71.08 temperature 30.0 4320 > th dose independent rect. 18 1
209 71.15 temperature 30.0 4320 < th dose independent rect. 18 9
226 71.39 temperature 30.0 720 < th dose independent rect. 18 15
227 71.40 temperature 25.0 720 < th dose independent rect. 17 7
235 71.71 precipitation 0.1 270 < th dose independent rect. 24 11
236 71.71 precipitation 0.1 270 < th dose dependent rect. 24 11
240 71.77 radiation 1.0 720 > th dose independent rect. 18 1
273 72.14 humidity 90.0 720 < th dose dependent rect. 18 1
276 72.16 temperature 25.0 720 > th dose dependent sin 12 NA
287 72.32 temperature 25.0 270 < th dose independent rect. 19 5
293 72.37 humidity 80.0 720 < th dose independent rect. 18 1
303 72.60 wind 1.0 10 > th dose independent rect. 21 21
316 72.69 temperature 20.0 10 > th dose independent rect. 18 12
331 72.82 humidity 70.0 4320 < th dose dependent rect. 19 2
354 72.98 humidity 70.0 4320 < th dose independent rect. 19 1
370 73.05 radiation 20.0 1440 > th dose independent rect. 16 15
372 73.06 atmosphere 995.0 30 > th dose dependent rect. 18 3
380 73.12 wind 9.0 270 < th dose independent rect. 24 11
382 73.14 temperature 10.0 270 > th dose independent rect. 24 11
383 73.14 atmosphere 995.0 270 > th dose independent rect. 24 11
384 73.14 temperature 10.0 270 > th dose independent rect. 11 13
385 73.15 radiation 20.0 1440 > th dose independent rect. 16 1
395 73.15 atmosphere 1015.0 270 < th dose independent rect. 24 11
405 73.22 precipitation 0.1 720 < th dose independent rect. 9 10
406 73.22 precipitation 0.1 720 < th dose dependent rect. 9 10
414 73.30 wind 9.0 270 < th dose independent rect. 11 13
419 73.35 precipitation 0.1 720 < th dose independent rect. 17 2
420 73.35 precipitation 0.1 720 < th dose dependent rect. 17 2
424 73.40 radiation 20.0 1440 < th dose independent rect. 16 3
426 73.41 radiation 20.0 1440 < th dose independent rect. 16 1
427 73.41 temperature 10.0 30 > th dose dependent rect. 18 3
469 73.52 radiation 40.0 720 < th dose dependent rect. 21 10
500 73.56 temperature 20.0 30 > th dose independent rect. 18 3
506 73.62 wind 9.0 30 < th dose independent rect. 21 21
507 73.63 radiation 20.0 1440 < th dose independent rect. 16 11
517 73.71 humidity 70.0 720 > th dose independent rect. 21 10
518 73.72 radiation 20.0 1440 < th dose independent rect. 16 9
526 73.80 radiation 20.0 720 < th dose independent rect. 21 10
528 73.81 humidity 60.0 4320 > th dose independent rect. 18 1
529 73.82 humidity 60.0 4320 > th dose independent rect. 18 9
530 73.82 humidity 50.0 270 > th dose independent rect. 24 11
540 73.89 humidity 60.0 4320 > th dose independent rect. 18 7
543 73.89 radiation 10.0 30 < th dose dependent rect. 18 3
546 73.91 radiation 1.0 720 > th dose dependent rect. 18 1
564 73.97 radiation 1.0 30 < th dose independent rect. 18 3
566 73.97 precipitation 0.1 270 < th dose independent rect. 15 13
567 73.97 precipitation 0.1 270 < th dose dependent rect. 15 13
568 73.98 wind 3.0 270 > th dose independent rect. 16 3
571 73.99 temperature 10.0 720 > th dose independent rect. 21 10
572 73.99 temperature 30.0 720 < th dose independent rect. 21 10
573 73.99 humidity 50.0 720 > th dose independent rect. 21 10
575 73.99 atmosphere 995.0 720 > th dose independent rect. 21 10
577 73.99 temperature 10.0 720 > th dose independent rect. 7 14
579 74.00 precipitation 0.1 720 < th dose independent rect. 7 14
581 74.00 precipitation 0.1 720 < th dose dependent rect. 7 14
587 74.03 radiation 20.0 1440 < th dose independent rect. 16 7
591 74.05 temperature 10.0 30 > th dose independent rect. 18 3
593 74.05 humidity 50.0 30 > th dose independent rect. 18 3
594 74.05 atmosphere 1010.0 30 < th dose independent rect. 18 3
596 74.05 radiation 20.0 30 < th dose independent rect. 18 3
599 74.05 temperature 10.0 30 > th dose independent rect. 21 21
601 74.06 wind 9.0 30 < th dose independent rect. 18 3
602 74.06 atmosphere 995.0 30 > th dose independent rect. 18 3
605 74.07 wind 1.0 30 > th dose independent rect. 18 3
610 74.09 humidity 60.0 4320 > th dose independent rect. 18 14
616 74.17 wind 7.0 720 < th dose independent rect. 17 2
628 74.21 humidity 60.0 4320 > th dose independent rect. 18 5
629 74.22 wind 9.0 720 < th dose independent rect. 21 10
637 74.27 radiation 1.0 720 < th dose independent rect. 17 7
643 74.33 radiation 40.0 270 < th dose independent rect. 15 13
659 74.42 temperature 10.0 720 > th dose independent rect. 9 10
660 74.42 atmosphere 1015.0 720 < th dose independent rect. 9 10
661 74.42 temperature 10.0 720 > th dose independent rect. 19 14
662 74.42 humidity 50.0 720 > th dose independent rect. 19 14
663 74.42 atmosphere 995.0 720 > th dose independent rect. 19 14
664 74.43 humidity 50.0 720 > th dose dependent rect. 19 5
692 74.55 atmosphere 995.0 270 > th dose dependent rect. 16 3
693 74.55 wind 9.0 270 < th dose dependent rect. 24 11
706 74.57 humidity 70.0 720 < th dose dependent rect. 19 1
720 74.59 precipitation 0.1 10 < th dose independent rect. 18 3
721 74.59 wind 9.0 270 < th dose independent rect. 4 11
722 74.59 temperature 10.0 270 > th dose independent rect. 4 11
723 74.59 atmosphere 1015.0 270 < th dose independent rect. 4 11
724 74.59 temperature 10.0 270 > th dose independent rect. 15 13
725 74.59 precipitation 0.1 10 < th dose dependent rect. 18 3
736 74.64 temperature 30.0 30 < th dose independent rect. 18 3
738 74.66 wind 9.0 270 < th dose independent rect. 15 13
742 74.68 radiation 1.0 720 < th dose dependent rect. 17 7
749 74.73 temperature 10.0 1440 > th dose independent rect. 19 3
758 74.73 atmosphere 995.0 1440 > th dose independent rect. 19 3
759 74.73 radiation 1.0 1440 < th dose independent rect. 19 3
779 74.73 wind 9.0 720 < th dose independent rect. 19 14
780 74.73 temperature 10.0 1440 > th dose independent rect. 22 21
785 74.75 precipitation 0.1 720 < th dose independent rect. 24 19
788 74.75 precipitation 0.1 720 < th dose dependent rect. 24 19
794 74.79 atmosphere 995.0 30 > th dose independent rect. 21 21
801 74.89 atmosphere 995.0 270 > th dose independent rect. 4 11
804 74.90 atmosphere 1015.0 720 < th dose independent rect. 7 14
820 74.99 precipitation 0.1 270 < th dose independent rect. 4 11
821 74.99 precipitation 0.1 270 < th dose dependent rect. 4 11
831 75.02 radiation 40.0 720 < th dose independent rect. 19 14
840 75.06 precipitation 0.1 720 < th dose independent rect. 17 10
851 75.06 precipitation 0.1 720 < th dose dependent rect. 17 10
860 75.10 precipitation 0.1 30 < th dose independent rect. 21 21
876 75.10 precipitation 0.1 30 < th dose dependent rect. 21 21
900 75.16 temperature 30.0 10 < th dose dependent rect. 21 12
941 75.27 wind 9.0 270 < th dose independent rect. 19 21
957 75.34 temperature 25.0 1440 > th dose dependent rect. 7 1
973 75.41 wind 9.0 30 < th dose dependent rect. 18 3
989 75.45 radiation 1.0 30 < th dose dependent rect. 15 6