Os02g0177900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Carbohydrate kinase, FGGY family protein.
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Os02g0177900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Carbohydrate kinase, FGGY family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.61 | 0.307 | 9.71 | -0.121 | 0.66 | 0.531 | -0.784 | -0.0964 | -0.121 | 5.42 | 1012 | 5714 | -- | -- |
| 42.55 | 0.304 | 9.72 | -0.147 | 0.659 | 0.542 | -0.773 | -- | -0.131 | 5.41 | 1012 | 5731 | -- | -- |
| 44.02 | 0.309 | 9.71 | -0.135 | 0.656 | 0.518 | -- | -0.0411 | -0.126 | 5.6 | 1012 | 5879 | -- | -- |
| 44.02 | 0.309 | 9.71 | -0.144 | 0.656 | 0.522 | -- | -- | -0.126 | 5.57 | 1012 | 5879 | -- | -- |
| 66.15 | 0.379 | 9.72 | -0.0747 | -- | 0.467 | -- | 0.0308 | -0.0943 | -- | 1013 | 7732 | -- | -- |
| 49.98 | 0.331 | 9.74 | -0.328 | 0.648 | -- | -0.708 | -- | -0.231 | 5.42 | -- | -- | -- | -- |
| 51.19 | 0.335 | 9.74 | -0.329 | 0.645 | -- | -- | -- | -0.227 | 5.57 | -- | -- | -- | -- |
| 65.96 | 0.378 | 9.72 | -0.0923 | -- | 0.443 | -- | -- | -0.102 | -- | 1013 | 8775 | -- | -- |
| 44.31 | 0.31 | 9.71 | -- | 0.648 | 0.484 | -- | -- | -0.0958 | 5.57 | 1012 | 8636 | -- | -- |
| 72.82 | 0.399 | 9.75 | -0.308 | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
| 54.04 | 0.344 | 9.73 | -- | 0.64 | -- | -- | -- | -0.191 | 5.59 | -- | -- | -- | -- |
| 66.15 | 0.379 | 9.72 | -- | -- | 0.471 | -- | -- | -0.0854 | -- | 1013 | 8753 | -- | -- |
| 75.32 | 0.405 | 9.74 | -- | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.11 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 2 | 42.11 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 42.43 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 8 | 42.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 9 | 42.53 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 11 | 42.54 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 13 | 42.56 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 16 | 42.57 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 34 | 42.65 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 35 | 42.65 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 36 | 42.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 53 | 42.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 54 | 42.65 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 20 |
| 57 | 42.66 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 60 | 42.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 61 | 42.68 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 62 | 42.69 | humidity | 50.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 72 | 42.71 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 74 | 42.71 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 78 | 42.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 98 | 42.72 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 106 | 42.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 113 | 42.75 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 130 | 42.77 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 166 | 42.78 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 170 | 42.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 182 | 42.80 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 189 | 42.81 | humidity | 50.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 190 | 42.81 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 191 | 42.81 | humidity | 50.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 193 | 42.81 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 214 | 42.81 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 286 | 42.82 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 313 | 42.84 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 367 | 42.85 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 381 | 42.86 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 385 | 42.86 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 453 | 42.89 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 507 | 42.94 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 526 | 42.95 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 527 | 42.95 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 528 | 42.95 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 552 | 42.96 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 557 | 42.97 | humidity | 50.0 | 14400 | < th | dose independent | no | NA | NA |
| 715 | 42.98 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 785 | 43.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 809 | 43.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 813 | 43.02 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 816 | 43.02 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 826 | 43.02 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 911 | 43.04 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 912 | 43.04 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 929 | 43.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 965 | 43.05 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 969 | 43.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 987 | 43.06 | radiation | 40.0 | 43200 | < th | dose independent | sin | 9 | NA |