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Os02g0177800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Calmodulin-binding protein 60-B (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0171) R2 : 0.00744
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0665 (0.036) R2dN8 : 0.00961 R2N8 : 0.00744
σ : 0.322
deviance : 47.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.81 0.261 10.2 0.335 0.313 1.02 -0.0741 1.28 0.0411 2.86 1.429 1444 -- --
31.57 0.262 10.1 0.447 0.302 0.747 -0.0166 -- 0.0525 2.45 2.472 1438 -- --
30.82 0.259 10.2 0.34 0.312 1.01 -- 1.23 0.0419 2.78 1.494 1444 -- --
31.55 0.262 10.1 0.44 0.3 0.766 -- -- 0.057 2.63 2.493 1438 -- --
33.55 0.27 10.2 0.316 -- 1.01 -- 1.25 0.0468 -- 1.847 4619 -- --
39.26 0.294 10.2 0.3 0.311 -- -0.141 -- -0.0401 2.71 -- -- -- --
39.33 0.294 10.2 0.303 0.309 -- -- -- -0.0392 2.58 -- -- -- --
32.1 0.264 10.1 0.434 -- 0.758 -- -- 0.0998 -- 3.359 4681 -- --
36.55 0.282 10.1 -- 0.332 0.653 -- -- 0.0663 2.83 5.395 1450 -- --
44.93 0.313 10.2 0.316 -- -- -- -- -0.0314 -- -- -- -- --
41.75 0.302 10.2 -- 0.315 -- -- -- -0.073 2.59 -- -- -- --
36.37 0.281 10.1 -- -- 0.664 -- -- 0.059 -- 4.862 4724 -- --
47.57 0.322 10.2 -- -- -- -- -- -0.0665 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.13 humidity 70 14400 < th dose dependent rect. 18 1
2 28.22 humidity 60 14400 < th dose independent rect. 17 15
3 28.23 humidity 60 14400 < th dose independent rect. 17 2
4 28.25 humidity 70 14400 < th dose independent rect. 19 13
6 28.27 humidity 70 14400 < th dose dependent rect. 18 13
7 28.28 humidity 60 14400 < th dose independent rect. 17 5
19 28.30 humidity 70 14400 < th dose independent rect. 19 3
29 28.32 humidity 70 14400 < th dose dependent rect. 18 4
39 28.36 humidity 60 14400 > th dose independent rect. 17 15
41 28.38 humidity 80 720 > th dose independent rect. 8 14
43 28.39 humidity 60 14400 > th dose independent rect. 17 5
46 28.39 humidity 60 14400 > th dose independent rect. 17 11
56 28.56 humidity 60 14400 < th dose dependent rect. 16 16
58 28.58 humidity 60 14400 < th dose dependent rect. 16 3
120 29.13 humidity 70 14400 > th dose independent rect. 19 4
123 29.14 humidity 70 14400 > th dose independent rect. 19 9
133 29.16 humidity 80 720 > th dose dependent rect. 7 15
137 29.22 humidity 50 14400 > th dose independent rect. 16 18
155 29.28 humidity 50 14400 < th dose independent rect. 17 17
174 29.42 humidity 80 720 > th dose independent sin 20 NA
240 29.59 humidity 80 720 < th dose independent rect. 8 14
246 29.60 radiation 1 720 < th dose dependent rect. 5 20
278 29.71 radiation 1 720 < th dose dependent rect. 5 22
357 29.94 humidity 70 720 > th dose dependent sin 21 NA
361 29.98 radiation 20 4320 < th dose independent rect. 7 1
383 30.12 radiation 1 720 < th dose independent rect. 5 20
407 30.16 radiation 20 4320 < th dose independent rect. 18 14
414 30.17 radiation 1 720 < th dose independent rect. 5 22
417 30.18 radiation 20 4320 < th dose independent rect. 5 3
418 30.18 radiation 20 4320 < th dose independent rect. 3 5
429 30.19 radiation 20 4320 < th dose independent rect. 22 10
450 30.28 humidity 60 1440 > th dose dependent rect. 11 1
456 30.31 humidity 80 720 > th dose independent rect. 24 22
480 30.40 temperature 20 10 > th dose dependent rect. 3 21
484 30.42 radiation 10 1440 > th dose independent rect. 15 16
508 30.44 radiation 1 720 > th dose independent rect. 17 22
512 30.45 temperature 20 10 > th dose dependent rect. 9 15
514 30.46 temperature 30 14400 < th dose independent rect. 18 3
518 30.47 temperature 30 14400 < th dose independent rect. 18 1
522 30.47 temperature 30 14400 < th dose independent rect. 18 14
527 30.48 humidity 80 720 < th dose independent sin 21 NA
547 30.50 temperature 30 14400 < th dose independent rect. 18 8
548 30.50 temperature 30 14400 < th dose independent rect. 18 10
556 30.50 temperature 25 14400 > th dose dependent rect. 19 1
560 30.51 radiation 10 14400 > th dose dependent rect. 17 1
578 30.52 radiation 40 1440 < th dose dependent rect. 17 3
583 30.53 radiation 40 1440 < th dose dependent rect. 17 6
584 30.53 radiation 20 4320 > th dose dependent rect. 15 18
593 30.56 radiation 30 4320 < th dose independent rect. 16 18
597 30.56 radiation 30 4320 > th dose dependent rect. 8 1
598 30.56 radiation 1 720 < th dose dependent rect. 5 14
613 30.58 temperature 10 1440 > th dose dependent rect. 11 1
615 30.59 radiation 20 14400 < th dose independent rect. 16 4
620 30.59 radiation 20 14400 < th dose independent rect. 16 7
626 30.59 radiation 20 14400 < th dose independent rect. 16 12
653 30.60 radiation 40 1440 < th dose dependent rect. 17 13
661 30.61 radiation 1 1440 < th dose dependent sin 14 NA
663 30.61 humidity 80 1440 > th dose dependent rect. 10 4
693 30.63 radiation 40 1440 < th dose dependent rect. 17 11
702 30.64 radiation 1 1440 < th dose dependent rect. 15 11
703 30.64 radiation 1 1440 < th dose dependent rect. 15 13
709 30.65 radiation 1 1440 < th dose dependent rect. 15 4
729 30.66 temperature 15 10 > th dose dependent rect. 3 23
740 30.67 radiation 40 1440 < th dose dependent rect. 17 9
747 30.68 temperature 30 14400 < th dose independent rect. 15 18
757 30.69 radiation 1 1440 > th dose independent sin 14 NA
760 30.69 temperature 30 14400 > th dose independent rect. 15 18
767 30.69 radiation 1 1440 < th dose dependent rect. 7 23
788 30.70 temperature 25 1440 > th dose dependent rect. 7 4
822 30.71 radiation 10 1440 < th dose dependent rect. 17 11
827 30.72 radiation 1 1440 < th dose independent sin 14 NA
828 30.72 temperature 30 14400 < th dose independent rect. 15 4
846 30.72 temperature 30 14400 > th dose independent rect. 17 16
852 30.72 radiation 10 1440 < th dose dependent rect. 17 9
857 30.73 temperature 30 14400 < th dose independent sin 12 NA
858 30.73 temperature 30 14400 > th dose independent rect. 15 4
878 30.74 temperature 30 14400 > th dose independent sin 12 NA
883 30.74 radiation 1 1440 > th dose independent rect. 7 23
914 30.76 humidity 80 720 > th dose independent rect. 8 22
944 30.77 temperature 30 14400 > th dose dependent rect. 17 16
952 30.78 radiation 1 1440 < th dose independent rect. 7 23
959 30.78 radiation 1 1440 < th dose dependent rect. 15 15