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Os02g0176100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Wilm's tumour protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0211) R2 : 0.756
β1 : -0.825 (0.0771) R2dD : 0.064 R2D : 0.0721
β2 : 0.721 (0.061) R2dC : 0.0931 R2C : 0.265
β3 : -1.52 (0.0622) R2dE : 0.407 R2E : 0.596
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0968 (0.0453) R2dN8 : 0.00335 R2N8 : 0.00622
σ : 0.393
deviance : 71.13
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_____
C
peak time of C : 18.3
E
wheather : temperature
threshold : 20.81
memory length : 368
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.72
open length of G : 3.34

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.77 0.401 10.3 -0.824 0.744 -1.63 -0.0947 0.0822 -0.111 18.1 20.8 345 4.77 3.85
71.96 0.395 10.4 -0.788 0.717 -1.63 -0.335 -- -0.122 17.7 20.81 357 4.77 3.63
71.56 0.394 10.4 -0.813 0.709 -1.6 -- 0.346 -0.127 18.2 20.81 359 4.71 3.48
71.13 0.393 10.3 -0.825 0.721 -1.52 -- -- -0.0968 18.3 20.81 368 4.72 3.34
91.52 0.446 10.3 -0.686 -- -1.86 -- 0.781 -0.00476 -- 20.71 348 4.68 3.38
126.93 0.528 10.4 -0.953 1.56 -- 0.729 -- -0.266 20.3 -- -- -- --
128.51 0.531 10.4 -0.973 1.56 -- -- -- -0.264 20.2 -- -- -- --
87.85 0.437 10.3 -0.808 -- -1.89 -- -- -0.0324 -- 20.8 369 4.52 2.98
88.91 0.439 10.3 -- 0.73 -1.54 -- -- -0.0293 18.1 20.91 371 4.63 3.48
263.18 0.758 10.4 -0.985 -- -- -- -- -0.282 -- -- -- -- --
153.48 0.58 10.4 -- 1.57 -- -- -- -0.156 20.2 -- -- -- --
105.18 0.478 10.3 -- -- -1.9 -- -- 0.026 -- 20.7 372 4.43 3.07
288.77 0.793 10.3 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.99 temperature 10.0 270 > th dose dependent rect. 3 7
3 78.28 temperature 15.0 270 > th dose dependent rect. 4 5
10 80.51 temperature 15.0 270 > th dose dependent rect. 5 3
14 81.99 temperature 20.0 270 > th dose independent rect. 5 4
17 82.84 temperature 20.0 270 > th dose independent rect. 4 6
29 84.88 temperature 20.0 270 > th dose independent rect. 6 1
42 87.09 temperature 20.0 10 > th dose dependent rect. 6 5
44 87.23 temperature 10.0 270 > th dose dependent rect. 21 7
47 87.61 wind 5.0 270 < th dose independent rect. 3 7
52 88.00 humidity 60.0 270 > th dose independent rect. 3 7
56 88.20 humidity 60.0 90 > th dose independent rect. 5 6
60 88.50 temperature 25.0 10 > th dose independent rect. 6 5
64 88.58 atmosphere 1010.0 90 < th dose independent rect. 5 6
73 88.92 wind 5.0 90 < th dose independent rect. 5 6
76 89.02 wind 9.0 90 < th dose dependent rect. 5 6
81 89.34 humidity 80.0 270 > th dose independent rect. 5 3
90 89.69 precipitation 0.1 270 < th dose independent rect. 3 7
91 89.69 precipitation 0.1 270 < th dose dependent rect. 3 7
94 89.78 radiation 1.0 90 < th dose dependent sin 7 NA
98 89.86 precipitation 0.1 270 < th dose independent rect. 10 17
99 89.86 precipitation 0.1 270 < th dose dependent rect. 10 17
100 90.11 temperature 15.0 270 > th dose independent rect. 5 16
108 90.46 atmosphere 995.0 270 > th dose independent rect. 3 7
109 90.46 atmosphere 1015.0 270 < th dose independent rect. 3 7
110 90.46 temperature 10.0 270 > th dose independent rect. 10 17
113 90.51 precipitation 0.1 90 < th dose independent rect. 5 6
114 90.51 precipitation 0.1 90 < th dose dependent rect. 5 6
120 90.60 radiation 1.0 90 > th dose independent sin 7 NA
121 90.63 radiation 1.0 90 < th dose independent sin 8 NA
127 90.75 atmosphere 995.0 90 > th dose independent rect. 5 6
129 90.75 radiation 1.0 90 > th dose independent rect. 4 7
141 90.81 wind 1.0 90 > th dose independent rect. 5 6
149 91.15 radiation 20.0 270 < th dose independent rect. 5 3
160 91.49 radiation 40.0 90 < th dose independent rect. 5 6
161 91.51 wind 9.0 270 < th dose independent rect. 10 17
163 91.52 radiation 20.0 270 < th dose independent rect. 17 15
166 91.59 radiation 1.0 270 < th dose dependent rect. 21 14
176 91.69 humidity 60.0 10 > th dose independent rect. 6 5
177 91.70 radiation 1.0 270 < th dose dependent sin 10 NA
179 91.79 wind 9.0 270 < th dose dependent rect. 3 8
188 91.99 radiation 40.0 10 < th dose independent rect. 6 5
192 92.09 humidity 50.0 270 > th dose dependent rect. 4 6
195 92.15 atmosphere 1015.0 90 < th dose independent rect. 11 18
205 92.37 radiation 1.0 270 < th dose dependent rect. 21 8
206 92.41 temperature 10.0 10 > th dose dependent rect. 22 8
218 92.59 wind 9.0 270 < th dose independent rect. 5 16
223 92.65 humidity 50.0 270 > th dose dependent rect. 5 4
227 92.70 radiation 1.0 270 < th dose independent rect. 21 8
232 92.71 wind 9.0 270 < th dose independent rect. 21 8
233 92.71 temperature 10.0 270 > th dose independent rect. 21 8
234 92.71 temperature 30.0 270 < th dose independent rect. 21 8
235 92.71 humidity 50.0 270 > th dose independent rect. 21 8
238 92.71 atmosphere 995.0 270 > th dose independent rect. 21 8
242 92.71 radiation 1.0 90 < th dose independent rect. 23 8
277 93.19 atmosphere 995.0 90 > th dose independent rect. 11 18
280 93.23 radiation 20.0 270 < th dose independent rect. 4 5
284 93.29 temperature 10.0 270 > th dose independent rect. 8 9
285 93.29 atmosphere 1015.0 270 < th dose independent rect. 8 9
286 93.29 temperature 10.0 270 > th dose independent rect. 17 15
289 93.32 radiation 40.0 270 < th dose independent rect. 3 7
290 93.32 precipitation 0.1 270 < th dose independent rect. 21 8
291 93.32 precipitation 0.1 270 < th dose dependent rect. 21 8
299 93.40 wind 5.0 10 < th dose independent rect. 6 5
311 93.50 atmosphere 995.0 270 > th dose independent rect. 17 15
319 93.62 wind 9.0 270 < th dose independent rect. 17 15
323 93.64 wind 1.0 10 > th dose independent rect. 6 5
342 93.87 wind 9.0 10 < th dose independent rect. 6 5
345 93.89 temperature 10.0 10 > th dose independent rect. 6 5
348 93.89 atmosphere 995.0 10 > th dose independent rect. 6 5
349 93.89 atmosphere 1015.0 10 < th dose independent rect. 6 5
350 93.89 precipitation 0.1 10 < th dose independent rect. 6 5
351 93.89 temperature 10.0 10 > th dose independent rect. 11 19
352 93.89 precipitation 0.1 10 < th dose dependent rect. 6 5
353 93.90 wind 1.0 270 > th dose independent rect. 3 7
358 93.92 radiation 40.0 270 < th dose dependent rect. 5 3
360 93.94 radiation 1.0 90 < th dose dependent rect. 23 8
393 94.01 temperature 30.0 270 < th dose independent rect. 3 7
394 94.01 precipitation 0.1 270 < th dose independent rect. 8 9
396 94.01 precipitation 0.1 270 < th dose dependent rect. 8 9
398 94.02 atmosphere 1015.0 270 < th dose independent rect. 5 16
438 94.19 humidity 90.0 10 < th dose independent rect. 5 6
440 94.20 temperature 10.0 1440 > th dose independent rect. 6 6
443 94.20 atmosphere 995.0 1440 > th dose independent rect. 6 6
444 94.20 temperature 10.0 1440 > th dose independent rect. 12 18
450 94.22 humidity 50.0 270 > th dose independent rect. 17 15
451 94.23 wind 9.0 270 < th dose dependent rect. 22 6
476 94.35 atmosphere 1015.0 10 < th dose independent rect. 11 19
478 94.36 humidity 50.0 10 > th dose dependent rect. 6 5
490 94.45 radiation 1.0 90 < th dose dependent rect. 23 12
492 94.47 radiation 1.0 90 < th dose independent rect. 23 12
530 94.75 precipitation 0.1 270 < th dose independent rect. 5 16
532 94.75 precipitation 0.1 270 < th dose dependent rect. 5 16
582 95.14 precipitation 0.1 270 < th dose independent rect. 5 2
584 95.14 precipitation 0.1 270 < th dose dependent rect. 5 2
586 95.15 atmosphere 1015.0 270 < th dose independent rect. 22 6
587 95.18 wind 9.0 270 < th dose independent rect. 8 9
591 95.19 precipitation 0.1 270 < th dose independent rect. 17 15
593 95.19 humidity 50.0 270 > th dose dependent rect. 21 7
594 95.19 precipitation 0.1 270 < th dose dependent rect. 17 15
597 95.21 temperature 10.0 270 > th dose independent rect. 5 2
599 95.21 temperature 30.0 270 < th dose independent rect. 5 2
600 95.21 humidity 50.0 270 > th dose independent rect. 5 2
602 95.21 atmosphere 995.0 270 > th dose independent rect. 5 2
603 95.21 atmosphere 1015.0 270 < th dose independent rect. 5 2
606 95.21 temperature 10.0 270 > th dose independent rect. 7 22
623 95.32 wind 1.0 10 > th dose independent rect. 17 18
633 95.43 humidity 90.0 30 < th dose independent rect. 2 9
634 95.46 radiation 40.0 10 < th dose dependent rect. 6 5
636 95.47 atmosphere 995.0 10 > th dose independent rect. 11 19
645 95.55 wind 1.0 10 > th dose independent rect. 19 16
670 95.67 humidity 60.0 30 > th dose independent rect. 19 16
680 95.70 precipitation 0.1 270 < th dose independent rect. 7 22
681 95.70 precipitation 0.1 270 < th dose dependent rect. 7 22
683 95.74 radiation 1.0 270 > th dose independent rect. 18 13
692 95.79 radiation 1.0 270 > th dose independent rect. 4 3
705 95.81 atmosphere 995.0 270 > th dose dependent rect. 9 7
716 95.87 atmosphere 995.0 270 > th dose independent rect. 9 8
721 95.92 wind 9.0 270 < th dose dependent rect. 23 4
756 96.03 atmosphere 1015.0 270 < th dose independent rect. 21 8
760 96.05 wind 9.0 10 < th dose independent rect. 11 19
762 96.06 radiation 1.0 270 > th dose independent rect. 9 8
765 96.07 temperature 30.0 10 < th dose independent rect. 6 5
780 96.24 wind 1.0 270 > th dose independent rect. 4 17
781 96.24 temperature 10.0 10 > th dose dependent rect. 6 16
802 96.38 radiation 40.0 270 < th dose dependent rect. 16 17
804 96.40 humidity 80.0 270 > th dose independent rect. 23 4
806 96.41 temperature 10.0 90 > th dose dependent rect. 11 18
807 96.42 wind 1.0 270 > th dose independent rect. 9 8
808 96.43 wind 1.0 270 > th dose independent rect. 10 17
809 96.44 wind 5.0 270 < th dose independent rect. 23 4
811 96.45 humidity 50.0 10 > th dose dependent rect. 22 8
837 96.63 radiation 40.0 270 < th dose dependent rect. 17 15
842 96.66 radiation 1.0 270 < th dose independent rect. 21 14
900 96.83 wind 9.0 10 < th dose dependent rect. 22 8
901 96.84 atmosphere 1015.0 90 < th dose dependent rect. 5 6
954 97.09 radiation 40.0 30 < th dose independent rect. 19 16
955 97.10 humidity 50.0 270 > th dose dependent rect. 23 4
956 97.11 wind 9.0 270 < th dose independent rect. 3 20