Os02g0175800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0175800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15 | 0.182 | 14 | -0.773 | 0.325 | -0.336 | -0.265 | -0.0467 | -0.261 | 22.2 | 74.86 | 1515 | -- | -- |
| 15 | 0.18 | 14 | -0.776 | 0.326 | -0.338 | -0.265 | -- | -0.262 | 22.2 | 74.93 | 1529 | -- | -- |
| 15.27 | 0.182 | 14 | -0.763 | 0.326 | -0.333 | -- | -0.0292 | -0.261 | 22.5 | 75 | 1588 | -- | -- |
| 15.27 | 0.182 | 14 | -0.764 | 0.326 | -0.337 | -- | -- | -0.262 | 22.5 | 75 | 1594 | -- | -- |
| 16.85 | 0.191 | 14 | -0.775 | -- | -0.494 | -- | 0.0667 | -0.27 | -- | 75.58 | 881 | -- | -- |
| 16.48 | 0.19 | 14 | -0.795 | 0.319 | -- | -0.255 | -- | -0.226 | 22.1 | -- | -- | -- | -- |
| 16.74 | 0.192 | 14 | -0.786 | 0.319 | -- | -- | -- | -0.226 | 22.1 | -- | -- | -- | -- |
| 16.81 | 0.191 | 14 | -0.767 | -- | -0.493 | -- | -- | -0.271 | -- | 74.01 | 876 | -- | -- |
| 29.65 | 0.254 | 14 | -- | 0.274 | -0.531 | -- | -- | -0.203 | 22.9 | 82 | 1722 | -- | -- |
| 22.91 | 0.224 | 14 | -0.781 | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
| 33 | 0.269 | 14 | -- | 0.316 | -- | -- | -- | -0.138 | 21.9 | -- | -- | -- | -- |
| 31.49 | 0.261 | 14 | -- | -- | -0.555 | -- | -- | -0.22 | -- | 82.94 | 885 | -- | -- |
| 39.01 | 0.292 | 14 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 17 |
| 2 | 14.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 3 | 14.67 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 4 | 14.67 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 5 | 14.68 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 7 | 14.68 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 13 | 14.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 15 | 14.72 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 18 | 14.73 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 19 | 14.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 21 | 14.73 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 13 | 9 |
| 23 | 14.74 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 26 | 14.75 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 27 | 14.75 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 32 | 14.75 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 33 | 14.75 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 40 | 14.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 42 | 14.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 48 | 14.76 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 53 | 14.77 | humidity | 90.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 70 | 14.79 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 74 | 14.79 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 88 | 14.80 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 112 | 14.82 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 129 | 14.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 144 | 14.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 19 |
| 147 | 14.84 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 162 | 14.85 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 165 | 14.85 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 166 | 14.85 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 181 | 14.86 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 23 |
| 188 | 14.86 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 208 | 14.88 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 240 | 14.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 396 | 14.95 | humidity | 90.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 656 | 15.01 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 703 | 15.03 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 769 | 15.04 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 20 |
| 775 | 15.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 782 | 15.04 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 798 | 15.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 815 | 15.05 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 17 |
| 837 | 15.05 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 898 | 15.07 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 932 | 15.07 | humidity | 80.0 | 1440 | > th | dose dependent | no | NA | NA |
| 960 | 15.08 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 961 | 15.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 982 | 15.08 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 15 |
| 983 | 15.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 4 | 18 |
| 996 | 15.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |