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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0175700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epsin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0391) R2 : 0.296
β1 : 0.264 (0.142) R2dD : 0.00558 R2D : 0.00335
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.26 (0.128) R2dE : 0.16 R2E : 0.135
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5.58 (0.571) R2dD*E : 0.15 R2D*E : 0.139
γ1 : 0.0873 (0.0857) R2dN8 : 0.00222 R2N8 : -0.00406
σ : 0.723
deviance : 240.96
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 6.743
memory length : 4319
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19
open length of G : 2.17

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
239.98 0.728 3.12 0.248 0.148 -1.22 0.106 -5.37 0.0861 12.8 6.8 4320 19 2.1
285.64 0.787 3.13 0.278 0.148 -1.25 -0.031 -- 0.0957 13 6.702 4318 19 2.02
239.59 0.721 3.12 0.268 0.148 -1.26 -- -5.54 0.0873 12.7 6.743 4319 19 2.17
285.63 0.787 3.13 0.28 0.148 -1.25 -- -- 0.0972 12.8 6.7 4318 19 2
240.96 0.723 3.12 0.264 -- -1.26 -- -5.58 0.0873 -- 6.743 4319 19 2.17
338.53 0.863 3.14 0.205 0.188 -- 0.159 -- -0.0266 12.5 -- -- -- --
338.63 0.862 3.14 0.211 0.187 -- -- -- -0.0259 12.5 -- -- -- --
266.73 0.761 3.13 0.146 -- -1.25 -- -- 0.0972 -- 8.7 4318 19 2.03
259.11 0.75 3.1 -- 0.266 -1.39 -- -- 0.182 13.7 8.601 4319 18.6 2.2
340.83 0.863 3.14 0.205 -- -- -- -- -0.029 -- -- -- -- --
339.81 0.862 3.14 -- 0.184 -- -- -- -0.0494 12.4 -- -- -- --
254.41 0.743 3.1 -- -- -1.71 -- -- 0.183 -- 8.7 4319 18.6 2.12
341.94 0.863 3.14 -- -- -- -- -- -0.0517 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 245.69 wind 7 4320 < th dose independent rect. 19 2
7 247.65 wind 9 4320 > th dose dependent rect. 20 2
22 248.08 wind 5 4320 > th dose dependent rect. 20 2
25 248.29 wind 7 4320 > th dose independent rect. 18 3
26 248.32 wind 9 4320 > th dose independent rect. 20 1
58 249.33 wind 9 4320 < th dose independent rect. 18 9
130 253.41 atmosphere 995 14400 > th dose independent rect. 16 3
131 253.41 atmosphere 995 14400 < th dose independent rect. 15 4
136 253.53 atmosphere 995 14400 < th dose independent rect. 16 1
142 253.71 atmosphere 995 14400 < th dose dependent rect. 16 1
200 254.04 atmosphere 995 14400 > th dose independent rect. 10 9
211 254.17 humidity 90 1440 < th dose dependent rect. 3 1
219 254.25 atmosphere 995 14400 > th dose independent rect. 7 12
387 259.06 temperature 20 720 < th dose independent rect. 18 1
407 260.02 radiation 1 14400 < th dose dependent rect. 23 1
432 261.04 wind 7 4320 < th dose independent rect. 8 1
436 261.27 humidity 90 1440 < th dose dependent rect. 2 5
444 261.90 wind 7 1440 > th dose independent rect. 8 1
468 262.43 humidity 90 1440 < th dose dependent rect. 24 7
509 263.36 radiation 1 14400 < th dose dependent rect. 19 8
517 263.48 atmosphere 995 14400 > th dose independent sin 22 NA
518 263.50 atmosphere 995 14400 < th dose independent sin 22 NA
522 263.51 radiation 1 14400 < th dose dependent rect. 19 6
525 263.62 atmosphere 995 14400 > th dose independent rect. 19 21
531 263.72 atmosphere 995 14400 < th dose dependent sin 23 NA
539 263.85 wind 5 1440 > th dose dependent rect. 8 1
562 264.43 humidity 80 1440 < th dose independent rect. 22 2
566 264.46 atmosphere 995 14400 > th dose independent sin 4 NA
581 264.58 temperature 20 4320 < th dose independent rect. 21 1
625 265.02 atmosphere 995 14400 < th dose independent sin 3 NA
671 265.57 humidity 80 1440 > th dose dependent rect. 5 1
672 265.63 temperature 20 1440 > th dose independent rect. 18 1
752 266.25 radiation 20 1440 > th dose independent rect. 6 1
873 266.71 humidity 90 1440 < th dose dependent rect. 24 4
876 266.73 atmosphere 995 14400 > th dose independent no NA NA
884 266.73 atmosphere 995 14400 > th dose independent rect. 10 23
885 266.73 atmosphere 995 14400 > th dose independent rect. 12 23
886 266.73 atmosphere 995 14400 > th dose independent rect. 14 23