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Os02g0175500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF266, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.65 (0.0113) R2 : 0.0393
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.103 (0.0238) R2dN8 : 0.0507 R2N8 : 0.0393
σ : 0.213
deviance : 20.79
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.11 0.176 9.66 0.239 0.0564 -0.669 0.327 -0.128 0.0836 18.5 20.4 1523 -- --
14.11 0.175 9.66 0.23 0.0558 -0.605 0.324 -- 0.0798 18.5 20.83 1504 -- --
14.35 0.176 9.66 0.225 0.0604 -0.629 -- -0.0134 0.0796 19.7 20.7 1522 -- --
14.35 0.176 9.66 0.224 0.0606 -0.624 -- -- 0.0795 19.7 20.74 1517 -- --
14.54 0.178 9.66 0.223 -- -0.612 -- 0.00242 0.0785 -- 20.83 1523 -- --
16.6 0.191 9.64 0.38 0.0482 -- 0.388 -- 0.144 18.6 -- -- -- --
16.95 0.193 9.64 0.374 0.053 -- -- -- 0.145 20.1 -- -- -- --
14.54 0.178 9.66 0.224 -- -0.613 -- -- 0.0785 -- 20.83 1523 -- --
14.96 0.18 9.66 -- 0.0652 -0.588 -- -- 0.0326 19.2 21.2 2937 -- --
17.1 0.193 9.64 0.374 -- -- -- -- 0.144 -- -- -- -- --
20.64 0.213 9.65 -- 0.0512 -- -- -- 0.103 20.6 -- -- -- --
15.15 0.181 9.67 -- -- -0.595 -- -- 0.0261 -- 21.19 2938 -- --
20.79 0.213 9.65 -- -- -- -- -- 0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.65 temperature 20.0 30 > th dose independent rect. 12 21
4 12.76 temperature 15.0 90 > th dose dependent rect. 12 21
9 12.91 temperature 10.0 270 > th dose dependent rect. 12 19
15 12.98 temperature 20.0 270 > th dose independent rect. 12 8
32 13.11 temperature 10.0 270 > th dose dependent rect. 12 11
67 13.27 radiation 1.0 270 > th dose independent rect. 7 5
71 13.30 temperature 15.0 270 > th dose independent rect. 8 3
72 13.30 temperature 15.0 270 > th dose independent rect. 7 5
73 13.31 radiation 1.0 1440 > th dose independent rect. 11 2
94 13.40 temperature 20.0 1440 < th dose dependent rect. 2 1
97 13.41 precipitation 0.1 270 < th dose independent rect. 8 3
98 13.41 temperature 15.0 1440 > th dose independent rect. 4 5
99 13.41 precipitation 0.1 270 < th dose independent rect. 7 5
101 13.41 precipitation 0.1 270 < th dose dependent rect. 8 3
102 13.41 precipitation 0.1 270 < th dose dependent rect. 7 5
105 13.42 wind 9.0 270 < th dose independent rect. 8 3
107 13.42 atmosphere 995.0 270 > th dose independent rect. 8 3
108 13.42 atmosphere 1015.0 270 < th dose independent rect. 8 3
109 13.42 wind 9.0 270 < th dose independent rect. 7 5
111 13.42 atmosphere 995.0 270 > th dose independent rect. 7 5
112 13.42 atmosphere 1015.0 270 < th dose independent rect. 7 5
130 13.45 precipitation 0.1 270 < th dose independent rect. 19 17
131 13.45 wind 9.0 270 < th dose independent rect. 12 19
132 13.45 atmosphere 1010.0 270 < th dose independent rect. 12 19
134 13.45 precipitation 0.1 270 < th dose dependent rect. 19 17
144 13.47 wind 9.0 270 < th dose independent rect. 11 21
146 13.47 temperature 20.0 1440 < th dose dependent rect. 24 4
148 13.48 humidity 50.0 270 > th dose independent rect. 8 3
154 13.48 wind 7.0 270 < th dose independent rect. 19 17
162 13.49 atmosphere 1010.0 90 < th dose independent rect. 12 21
186 13.52 temperature 20.0 1440 < th dose dependent rect. 24 1
189 13.53 wind 1.0 270 > th dose independent rect. 8 3
195 13.54 wind 1.0 270 > th dose independent rect. 7 5
203 13.55 temperature 20.0 30 > th dose independent rect. 12 14
229 13.59 humidity 90.0 90 < th dose independent rect. 9 3
232 13.59 atmosphere 1010.0 270 < th dose independent rect. 23 9
236 13.59 radiation 40.0 90 < th dose independent rect. 12 21
244 13.60 temperature 10.0 270 > th dose independent rect. 12 7
246 13.60 atmosphere 1010.0 270 < th dose independent rect. 12 7
261 13.60 temperature 10.0 270 > th dose independent rect. 19 17
262 13.60 atmosphere 995.0 270 > th dose independent rect. 19 17
286 13.62 temperature 15.0 270 > th dose independent rect. 22 9
298 13.63 temperature 15.0 1440 > th dose independent rect. 13 11
304 13.63 temperature 30.0 270 < th dose dependent rect. 7 17
317 13.65 wind 9.0 270 < th dose independent rect. 12 7
318 13.65 precipitation 0.1 270 < th dose independent rect. 7 15
324 13.65 precipitation 0.1 270 < th dose dependent rect. 7 15
362 13.69 temperature 10.0 43200 > th dose independent rect. 10 3
365 13.69 humidity 90.0 270 < th dose independent rect. 12 7
395 13.70 precipitation 0.1 270 < th dose independent rect. 12 7
409 13.70 precipitation 0.1 270 < th dose dependent rect. 12 7
471 13.75 temperature 30.0 270 < th dose independent rect. 8 3
479 13.75 wind 9.0 270 < th dose independent rect. 7 17
499 13.76 humidity 50.0 270 > th dose independent rect. 19 16
512 13.77 temperature 30.0 270 < th dose independent rect. 24 7
513 13.77 humidity 50.0 270 > th dose independent rect. 24 7
515 13.77 atmosphere 995.0 270 > th dose independent rect. 24 7
517 13.77 radiation 30.0 270 < th dose independent rect. 24 7
522 13.77 temperature 10.0 270 > th dose independent rect. 7 17
524 13.77 radiation 1.0 270 > th dose independent rect. 12 18
526 13.77 temperature 15.0 1440 > th dose independent rect. 13 20
538 13.78 wind 9.0 270 < th dose independent rect. 24 7
569 13.79 precipitation 0.1 270 < th dose independent rect. 12 19
580 13.79 precipitation 0.1 270 < th dose dependent rect. 12 19
610 13.81 atmosphere 1015.0 270 < th dose dependent rect. 12 7
637 13.82 atmosphere 995.0 270 > th dose independent rect. 12 19
661 13.83 temperature 20.0 1440 < th dose dependent sin 11 NA
666 13.83 radiation 40.0 270 < th dose dependent rect. 24 8
729 13.85 wind 9.0 270 < th dose dependent rect. 8 3
742 13.86 humidity 90.0 4320 > th dose independent rect. 10 1
750 13.86 radiation 1.0 270 > th dose independent rect. 12 6
809 13.88 wind 1.0 10 > th dose independent rect. 9 5
811 13.88 precipitation 0.1 270 < th dose independent rect. 24 7
828 13.88 precipitation 0.1 270 < th dose dependent rect. 24 7
837 13.88 atmosphere 1015.0 90 < th dose dependent rect. 13 20
846 13.89 atmosphere 995.0 270 > th dose independent rect. 7 17
889 13.90 temperature 30.0 270 < th dose independent rect. 19 17
934 13.92 precipitation 0.1 1440 < th dose independent rect. 10 3
938 13.92 wind 1.0 270 > th dose independent rect. 12 7
956 13.92 wind 1.0 270 > th dose independent rect. 12 19
960 13.92 temperature 20.0 1440 < th dose dependent rect. 5 1
962 13.92 temperature 10.0 90 > th dose dependent rect. 9 3
963 13.92 precipitation 0.1 1440 < th dose dependent rect. 10 3
974 13.93 radiation 1.0 270 < th dose independent sin 4 NA
980 13.93 atmosphere 995.0 270 > th dose independent rect. 12 7
995 13.93 humidity 50.0 270 > th dose dependent rect. 24 7