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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0173400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.08 (0.0167) R2 : 0.000207
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0108 (0.0352) R2dN8 : 0.000267 R2N8 : 0.000207
σ : 0.315
deviance : 45.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.32 0.309 3.04 0.186 0.058 -0.304 0.222 1.34 0.0161 8.38 49.73 4260 -- --
43.55 0.307 3.07 0.0314 0.0647 0.248 0.212 -- 0.0332 8.62 38.47 7726 -- --
43.45 0.307 3.04 0.195 0.0622 -0.31 -- 1.34 0.0148 7.2 49.51 4276 -- --
43.69 0.308 3.07 0.0396 0.0661 0.244 -- -- 0.0329 7.97 38.69 7245 -- --
43.66 0.308 3.04 0.196 -- -0.311 -- 1.34 0.0159 -- 49.66 4276 -- --
44.83 0.314 3.08 0.13 0.0616 -- 0.183 -- 0.0254 8.35 -- -- -- --
44.93 0.314 3.08 0.136 0.0625 -- -- -- 0.0251 7.88 -- -- -- --
43.92 0.309 3.08 0.0411 -- 0.242 -- -- 0.0337 -- 38.48 6737 -- --
43.72 0.308 3.07 -- 0.0667 0.261 -- -- 0.0297 7.94 38.32 7115 -- --
45.14 0.314 3.08 0.136 -- -- -- -- 0.0259 -- -- -- -- --
45.41 0.315 3.08 -- 0.0635 -- -- -- 0.01 7.73 -- -- -- --
43.96 0.309 3.08 -- -- 0.259 -- -- 0.0304 -- 38 7208 -- --
45.63 0.315 3.08 -- -- -- -- -- 0.0108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.40 radiation 40.0 43200 < th dose dependent rect. 21 1
2 41.41 temperature 10.0 1440 > th dose independent rect. 21 1
5 41.41 temperature 30.0 1440 < th dose independent rect. 21 1
9 41.41 humidity 50.0 1440 > th dose independent rect. 21 1
15 41.41 atmosphere 995.0 1440 > th dose independent rect. 21 1
16 41.41 radiation 1.0 1440 < th dose independent rect. 21 1
36 41.41 temperature 10.0 1440 > th dose independent rect. 22 23
46 41.47 temperature 25.0 30 > th dose independent rect. 20 1
47 41.47 atmosphere 1005.0 30 > th dose dependent rect. 20 1
48 41.48 wind 3.0 30 > th dose independent rect. 20 1
49 41.49 humidity 80.0 30 > th dose independent rect. 20 1
54 41.53 temperature 20.0 30 > th dose dependent rect. 20 1
56 41.55 atmosphere 1005.0 30 > th dose independent rect. 20 1
59 41.56 humidity 90.0 30 < th dose independent rect. 20 1
61 41.58 wind 1.0 30 > th dose dependent rect. 20 1
63 41.59 humidity 50.0 30 > th dose dependent rect. 20 1
65 41.60 wind 5.0 30 < th dose independent rect. 20 1
72 41.61 temperature 10.0 30 > th dose independent rect. 20 1
74 41.61 temperature 30.0 30 < th dose independent rect. 20 1
75 41.61 humidity 50.0 30 > th dose independent rect. 20 1
79 41.61 atmosphere 1010.0 30 < th dose independent rect. 20 1
81 41.61 radiation 1.0 30 < th dose independent rect. 20 1
86 41.61 precipitation 0.1 30 < th dose independent rect. 20 1
87 41.61 temperature 10.0 30 > th dose independent rect. 21 23
88 41.61 radiation 1.0 30 < th dose dependent rect. 20 1
93 41.61 precipitation 0.1 30 < th dose dependent rect. 20 1
94 41.65 wind 9.0 30 < th dose dependent rect. 20 1
102 41.79 wind 9.0 1440 < th dose independent rect. 21 1
103 41.80 atmosphere 1015.0 30 < th dose dependent rect. 20 1
105 41.84 humidity 90.0 30 < th dose dependent rect. 20 1
107 41.90 temperature 30.0 30 < th dose dependent rect. 20 1
110 41.94 wind 9.0 30 < th dose independent rect. 21 23
155 42.56 temperature 25.0 270 < th dose dependent rect. 5 2
161 42.80 humidity 90.0 4320 > th dose independent rect. 3 2
164 42.83 temperature 20.0 270 < th dose independent rect. 5 1
167 42.88 humidity 90.0 4320 < th dose independent rect. 4 1
171 42.91 temperature 25.0 90 < th dose independent rect. 7 2
172 42.91 precipitation 0.1 4320 > th dose dependent rect. 20 2
173 42.92 precipitation 0.1 4320 < th dose independent rect. 20 1
175 42.92 precipitation 0.1 4320 < th dose dependent rect. 20 1
176 42.93 temperature 25.0 30 > th dose independent rect. 20 3
179 42.94 precipitation 0.1 4320 > th dose independent rect. 20 1
183 42.98 wind 5.0 14400 < th dose independent rect. 11 1
189 43.01 humidity 90.0 4320 < th dose independent rect. 3 5
197 43.03 humidity 80.0 14400 < th dose dependent rect. 3 6
206 43.08 humidity 50.0 4320 > th dose dependent rect. 3 6
208 43.09 radiation 10.0 90 > th dose independent rect. 6 3
210 43.09 humidity 90.0 4320 > th dose independent rect. 3 5
220 43.09 wind 7.0 10 < th dose independent rect. 20 14
229 43.10 atmosphere 995.0 10 > th dose independent rect. 10 10
230 43.10 radiation 20.0 43200 < th dose dependent rect. 23 1
255 43.13 wind 3.0 10 > th dose independent rect. 7 1
256 43.13 precipitation 0.1 1440 < th dose independent rect. 23 1
257 43.13 humidity 90.0 720 < th dose independent rect. 3 2
260 43.13 precipitation 0.1 10 < th dose independent rect. 10 10
261 43.13 precipitation 0.1 1440 < th dose dependent rect. 23 1
262 43.13 precipitation 0.1 10 < th dose dependent rect. 10 10
263 43.14 humidity 70.0 14400 > th dose independent rect. 8 1
264 43.14 atmosphere 1005.0 10 > th dose dependent rect. 20 3
266 43.15 wind 5.0 14400 > th dose independent rect. 11 1
267 43.15 humidity 70.0 14400 < th dose independent rect. 8 1
272 43.15 temperature 10.0 10 > th dose independent rect. 10 10
274 43.15 atmosphere 1015.0 10 < th dose independent rect. 10 10
276 43.15 temperature 10.0 10 > th dose independent rect. 20 14
277 43.15 humidity 50.0 10 > th dose independent rect. 20 14
278 43.15 atmosphere 995.0 10 > th dose independent rect. 20 14
279 43.15 wind 1.0 10 > th dose dependent rect. 7 1
289 43.16 atmosphere 995.0 30 > th dose independent rect. 21 23
291 43.16 radiation 1.0 90 > th dose dependent rect. 6 3
304 43.17 humidity 90.0 720 > th dose independent rect. 3 1
306 43.17 temperature 25.0 10 < th dose independent rect. 6 2
308 43.17 wind 5.0 720 < th dose independent rect. 23 6
315 43.18 humidity 70.0 14400 > th dose independent rect. 5 4
322 43.18 wind 9.0 10 < th dose independent rect. 10 10
326 43.18 radiation 1.0 4320 < th dose dependent rect. 23 1
336 43.20 wind 1.0 90 > th dose independent rect. 7 2
347 43.20 wind 1.0 10 > th dose independent rect. 10 10
360 43.21 humidity 90.0 90 < th dose independent rect. 7 2
395 43.24 humidity 90.0 4320 > th dose dependent rect. 2 2
399 43.25 humidity 70.0 14400 < th dose independent rect. 6 3
404 43.25 humidity 50.0 4320 < th dose independent rect. 11 6
411 43.25 precipitation 0.1 14400 < th dose independent rect. 24 10
414 43.25 precipitation 0.1 30 < th dose independent rect. 20 14
421 43.25 precipitation 0.1 14400 < th dose dependent rect. 24 10
423 43.25 precipitation 0.1 30 < th dose dependent rect. 20 14
424 43.26 radiation 20.0 30 > th dose independent sin 11 NA
434 43.26 humidity 50.0 4320 > th dose independent rect. 12 5
451 43.26 precipitation 0.1 14400 > th dose independent rect. 24 9
480 43.26 temperature 30.0 10 < th dose dependent rect. 7 3
494 43.27 temperature 10.0 1440 > th dose independent rect. 11 10
504 43.27 temperature 10.0 1440 > th dose independent rect. 21 14
508 43.27 atmosphere 995.0 1440 > th dose independent rect. 21 14
519 43.27 wind 3.0 14400 > th dose dependent rect. 11 1
528 43.28 atmosphere 1015.0 10 < th dose independent rect. 20 14
531 43.28 wind 1.0 14400 < th dose dependent rect. 6 1
532 43.28 wind 7.0 14400 < th dose dependent rect. 11 1
539 43.29 humidity 90.0 10 < th dose independent rect. 7 3
583 43.31 humidity 50.0 4320 < th dose independent sin 0 NA
589 43.31 atmosphere 1015.0 4320 < th dose independent rect. 11 1
596 43.31 humidity 50.0 4320 > th dose independent rect. 12 12
600 43.31 humidity 50.0 4320 > th dose independent rect. 12 16
606 43.31 atmosphere 995.0 10 > th dose independent rect. 10 21
607 43.31 wind 1.0 90 < th dose dependent rect. 6 1
609 43.31 temperature 25.0 30 > th dose dependent rect. 20 3
611 43.31 wind 5.0 4320 > th dose dependent rect. 21 4
615 43.31 precipitation 0.1 14400 > th dose dependent rect. 24 9
623 43.32 humidity 50.0 4320 < th dose independent sin 22 NA
626 43.32 atmosphere 1015.0 4320 > th dose independent rect. 10 1
649 43.32 humidity 50.0 4320 > th dose independent rect. 3 14
657 43.32 humidity 50.0 4320 > th dose independent rect. 23 18
660 43.32 humidity 50.0 4320 > th dose independent rect. 21 20
670 43.32 atmosphere 1015.0 4320 > th dose dependent rect. 10 1
675 43.33 humidity 50.0 4320 < th dose independent sin 20 NA
678 43.33 humidity 50.0 4320 < th dose independent no NA NA
679 43.33 radiation 20.0 30 < th dose independent sin 11 NA
681 43.33 atmosphere 1015.0 4320 < th dose independent rect. 19 1
755 43.33 temperature 30.0 10 < th dose independent rect. 20 14
901 43.33 humidity 50.0 4320 < th dose dependent rect. 13 4
924 43.34 atmosphere 1015.0 4320 < th dose independent rect. 14 6
935 43.34 humidity 50.0 4320 < th dose independent rect. 15 23
937 43.34 humidity 50.0 4320 < th dose dependent rect. 13 1
955 43.35 humidity 50.0 4320 > th dose independent sin 19 NA
972 43.35 humidity 90.0 720 > th dose independent rect. 2 3