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Os02g0173100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 97B3 (EC 1.14.-.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0274) R2 : 0.84
β1 : -1.65 (0.1) R2dD : 0.0986 R2D : 0.095
β2 : 3.08 (0.067) R2dC : 0.746 R2C : 0.738
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0626 (0.0584) R2dN8 : 0.00054 R2N8 : -0.00174
σ : 0.514
deviance : 120.61
__
_____
C
peak time of C : 21.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
109.18 0.491 11 -1.74 3.01 -0.418 -0.551 -0.46 0.165 21.1 85.55 16 -- --
110.29 0.493 11 -1.7 3.02 -0.401 -0.329 -- 0.152 21.1 85.55 16 -- --
110 0.492 11 -1.71 3.01 -0.393 -- -0.316 0.147 21.1 85.55 16 -- --
110.66 0.493 11 -1.68 3.02 -0.392 -- -- 0.15 21.1 85.55 16 -- --
590.94 1.14 10.9 -1.55 -- -0.887 -- -0.295 0.0198 -- 78.63 7 -- --
120.57 0.515 11 -1.65 3.08 -- -0.104 -- 0.0625 21.5 -- -- -- --
120.61 0.514 11 -1.65 3.08 -- -- -- 0.0626 21.5 -- -- -- --
591.51 1.14 10.9 -1.54 -- -0.888 -- -- 0.0224 -- 78.58 8 -- --
185.2 0.637 10.9 -- 3.03 -0.329 -- -- 0.323 21.2 85.55 16 -- --
679.8 1.22 10.9 -1.63 -- -- -- -- 0.0548 -- -- -- -- --
192.22 0.649 11 -- 3.08 -- -- -- 0.246 21.5 -- -- -- --
654.25 1.2 10.9 -- -- -0.922 -- -- 0.192 -- 78.98 5 -- --
749.53 1.28 10.9 -- -- -- -- -- 0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 95.79 temperature 20.0 270 > th dose independent rect. 3 8
7 98.47 temperature 30.0 10 < th dose dependent rect. 24 8
8 98.88 radiation 20.0 30 < th dose dependent sin 7 NA
10 99.10 radiation 10.0 30 < th dose dependent sin 5 NA
15 99.43 temperature 25.0 30 > th dose independent rect. 19 16
17 99.50 radiation 10.0 90 < th dose dependent rect. 23 18
39 100.57 radiation 1.0 90 < th dose independent rect. 23 18
41 100.64 radiation 1.0 90 < th dose independent sin 5 NA
42 100.64 radiation 1.0 270 < th dose dependent rect. 21 21
44 100.70 radiation 1.0 270 < th dose dependent rect. 21 18
45 100.71 radiation 10.0 90 < th dose dependent rect. 23 11
46 100.74 radiation 1.0 90 > th dose independent sin 5 NA
49 100.78 temperature 30.0 270 < th dose dependent rect. 23 6
57 101.01 radiation 1.0 270 < th dose independent rect. 21 20
58 101.01 radiation 10.0 10 < th dose dependent rect. 24 17
59 101.02 temperature 15.0 270 > th dose dependent rect. 4 5
61 101.08 radiation 1.0 90 > th dose independent rect. 5 7
78 101.16 temperature 25.0 30 > th dose dependent rect. 19 14
81 101.20 radiation 1.0 270 < th dose dependent rect. 21 11
112 101.59 radiation 1.0 270 < th dose dependent sin 10 NA
116 101.64 temperature 10.0 10 > th dose dependent rect. 5 7
118 101.70 temperature 10.0 270 > th dose dependent rect. 18 15
139 101.94 temperature 25.0 10 < th dose independent rect. 24 9
143 101.99 radiation 1.0 270 < th dose independent rect. 21 11
145 102.01 radiation 1.0 270 < th dose independent sin 10 NA
171 102.25 precipitation 0.1 270 < th dose independent rect. 17 16
172 102.25 precipitation 0.1 270 < th dose dependent rect. 17 16
189 102.35 temperature 20.0 270 > th dose independent rect. 4 18
195 102.46 radiation 1.0 270 > th dose independent sin 10 NA
196 102.47 radiation 1.0 90 < th dose independent rect. 23 9
216 102.62 precipitation 0.1 270 < th dose independent rect. 3 8
217 102.62 precipitation 0.1 270 < th dose dependent rect. 3 8
219 102.64 radiation 1.0 90 < th dose independent rect. 1 16
226 102.69 temperature 25.0 10 > th dose dependent rect. 22 11
232 102.75 atmosphere 995.0 270 > th dose independent rect. 23 16
237 102.82 temperature 20.0 270 > th dose independent rect. 3 20
246 102.88 humidity 90.0 10 < th dose independent rect. 6 6
249 102.91 precipitation 0.1 270 < th dose independent rect. 4 18
250 102.91 precipitation 0.1 270 < th dose dependent rect. 4 18
265 103.03 precipitation 0.1 270 < th dose independent rect. 15 8
266 103.03 precipitation 0.1 270 < th dose dependent rect. 15 8
268 103.04 atmosphere 995.0 270 > th dose dependent rect. 23 5
306 103.24 humidity 50.0 270 > th dose independent rect. 23 16
307 103.24 humidity 50.0 270 > th dose independent rect. 11 17
309 103.25 atmosphere 995.0 270 > th dose independent rect. 9 8
311 103.26 wind 1.0 270 > th dose independent rect. 9 8
312 103.26 atmosphere 1015.0 270 < th dose independent rect. 23 16
317 103.28 temperature 10.0 270 > th dose independent rect. 15 8
318 103.28 temperature 10.0 270 > th dose independent rect. 23 16
328 103.33 wind 9.0 270 < th dose independent rect. 15 8
331 103.36 radiation 40.0 270 < th dose independent rect. 15 8
340 103.39 temperature 30.0 270 < th dose independent rect. 4 6
344 103.43 wind 9.0 270 < th dose independent rect. 23 16
348 103.48 wind 9.0 270 < th dose independent rect. 17 16
357 103.51 temperature 10.0 270 > th dose independent rect. 9 8
358 103.51 atmosphere 1015.0 270 < th dose independent rect. 9 8
359 103.51 temperature 10.0 270 > th dose independent rect. 17 16
361 103.52 temperature 30.0 270 < th dose independent rect. 3 8
377 103.53 radiation 1.0 270 > th dose independent rect. 17 16
384 103.57 temperature 10.0 270 > th dose independent rect. 3 8
385 103.57 atmosphere 995.0 270 > th dose independent rect. 3 8
386 103.57 atmosphere 1015.0 270 < th dose independent rect. 3 8
387 103.57 temperature 10.0 270 > th dose independent rect. 11 16
388 103.58 wind 1.0 90 > th dose independent rect. 12 17
389 103.59 wind 1.0 270 > th dose independent rect. 15 8
392 103.61 wind 9.0 270 < th dose independent rect. 3 8
395 103.62 temperature 25.0 10 > th dose dependent rect. 5 4
400 103.65 temperature 25.0 30 > th dose independent sin 8 NA
405 103.66 atmosphere 1000.0 270 > th dose independent rect. 23 5
406 103.66 wind 1.0 270 > th dose independent rect. 22 7
411 103.68 wind 9.0 270 < th dose independent rect. 9 8
414 103.71 temperature 25.0 10 > th dose dependent rect. 3 6
421 103.75 wind 1.0 270 > th dose independent rect. 24 15
422 103.75 wind 1.0 270 > th dose independent rect. 23 17
430 103.77 radiation 10.0 10 < th dose dependent rect. 24 11
432 103.79 humidity 50.0 270 > th dose independent rect. 3 8
436 103.80 temperature 15.0 270 > th dose independent rect. 22 6
444 103.85 radiation 1.0 270 > th dose independent rect. 5 4
446 103.86 atmosphere 995.0 270 > th dose independent rect. 17 16
462 103.94 humidity 50.0 270 > th dose independent rect. 9 8
466 103.95 temperature 30.0 270 < th dose independent rect. 22 6
467 103.95 humidity 50.0 270 > th dose independent rect. 22 6
471 103.95 radiation 1.0 270 < th dose independent rect. 22 6
477 103.95 temperature 10.0 270 > th dose independent rect. 4 18
478 103.95 radiation 1.0 270 < th dose dependent rect. 22 6
483 103.96 wind 9.0 270 < th dose independent rect. 22 6
505 104.00 atmosphere 995.0 270 > th dose independent rect. 11 16
509 104.01 temperature 25.0 10 > th dose dependent rect. 24 9
515 104.05 wind 1.0 90 > th dose independent rect. 1 5
521 104.09 wind 9.0 270 < th dose independent rect. 11 16
526 104.11 precipitation 0.1 270 < th dose independent rect. 9 8
529 104.11 precipitation 0.1 270 < th dose dependent rect. 9 8
543 104.15 wind 9.0 270 < th dose independent rect. 4 18
586 104.26 temperature 10.0 10 > th dose dependent rect. 19 17
597 104.30 humidity 50.0 270 > th dose independent rect. 17 16
601 104.32 humidity 50.0 270 > th dose independent rect. 4 6
612 104.34 radiation 1.0 90 < th dose independent rect. 1 7
628 104.38 radiation 30.0 270 < th dose independent rect. 17 16
644 104.43 atmosphere 1015.0 270 < th dose independent rect. 22 6
664 104.49 temperature 25.0 30 < th dose independent sin 8 NA
677 104.52 temperature 20.0 10 > th dose dependent sin 7 NA
690 104.57 atmosphere 995.0 10 > th dose independent rect. 12 18
692 104.57 wind 9.0 270 < th dose dependent rect. 4 6
722 104.63 radiation 40.0 270 < th dose independent rect. 4 7
760 104.72 precipitation 0.1 270 < th dose independent rect. 11 16
762 104.72 precipitation 0.1 270 < th dose dependent rect. 11 16
792 104.80 precipitation 0.1 270 < th dose independent rect. 22 6
795 104.80 precipitation 0.1 270 < th dose dependent rect. 22 6
828 104.86 precipitation 0.1 270 < th dose independent rect. 23 16
829 104.86 precipitation 0.1 270 < th dose dependent rect. 23 16
888 105.02 wind 9.0 10 < th dose independent rect. 6 6
937 105.14 precipitation 0.1 10 < th dose independent rect. 6 6
939 105.14 precipitation 0.1 10 < th dose dependent rect. 6 6
941 105.15 atmosphere 1015.0 270 < th dose independent rect. 4 18
946 105.16 humidity 50.0 10 > th dose independent rect. 12 18
969 105.24 temperature 10.0 10 > th dose independent rect. 6 6
971 105.24 atmosphere 995.0 10 > th dose independent rect. 6 6
972 105.24 atmosphere 1015.0 10 < th dose independent rect. 6 6
975 105.24 temperature 10.0 10 > th dose independent rect. 12 18
999 105.34 wind 9.0 10 < th dose dependent rect. 6 6