Os02g0171700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0171700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.18 | 0.521 | 3.01 | -0.348 | 0.0933 | 7.87 | -0.135 | -26.5 | 0.0503 | 15.5 | -0.1358 | 191 | -- | -- |
| 125.57 | 0.522 | 2.93 | -0.107 | 0.0247 | 1.65 | -0.146 | -- | 0.00457 | 8.62 | 1.504 | 275 | -- | -- |
| 123.22 | 0.517 | 3.01 | -0.346 | 0.0958 | 7.84 | -- | -26.4 | 0.0505 | 16.2 | -0.1441 | 190 | -- | -- |
| 125.48 | 0.522 | 2.91 | -0.149 | 0.0387 | 1.7 | -- | -- | 0.0409 | 12 | 1.515 | 239 | -- | -- |
| 122.97 | 0.516 | 3.01 | -0.385 | -- | 7.89 | -- | -27.1 | 0.0481 | -- | 0.3012 | 181 | -- | -- |
| 131.39 | 0.537 | 2.93 | -0.0859 | 0.0967 | -- | -0.158 | -- | 0.0214 | 14.6 | -- | -- | -- | -- |
| 131.42 | 0.537 | 2.93 | -0.0897 | 0.104 | -- | -- | -- | 0.0208 | 15.7 | -- | -- | -- | -- |
| 125.61 | 0.522 | 2.93 | -0.132 | -- | 1.65 | -- | -- | 0.0272 | -- | 1.5 | 241 | -- | -- |
| 125.66 | 0.522 | 2.93 | -- | 0.0881 | 1.66 | -- | -- | 0.0444 | 12.7 | 1.5 | 179 | -- | -- |
| 132.02 | 0.537 | 2.93 | -0.0941 | -- | -- | -- | -- | 0.0181 | -- | -- | -- | -- | -- |
| 131.63 | 0.537 | 2.93 | -- | 0.106 | -- | -- | -- | 0.0308 | 15.7 | -- | -- | -- | -- |
| 126.07 | 0.523 | 2.93 | -- | -- | 1.6 | -- | -- | 0.0398 | -- | 1.5 | 239 | -- | -- |
| 132.25 | 0.537 | 2.93 | -- | -- | -- | -- | -- | 0.0285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 115.64 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 10 | 117.80 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 14 | 117.80 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 27 | 119.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 40 | 120.48 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 43 | 120.70 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 10 |
| 57 | 121.34 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 59 | 121.44 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 71 | 121.65 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 23 | NA |
| 76 | 121.73 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 89 | 122.15 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 102 | 122.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 104 | 122.36 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 112 | 122.51 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 121 | 122.62 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 17 | 1 |
| 132 | 122.69 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 140 | 122.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 151 | 123.03 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 160 | 123.18 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 166 | 123.25 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 179 | 123.37 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 182 | 123.38 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 186 | 123.39 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 193 | 123.45 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 1 |
| 194 | 123.45 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 195 | 123.47 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 215 | 123.63 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 5 |
| 248 | 123.65 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 274 | 123.69 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 9 |
| 304 | 123.95 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 15 |
| 308 | 123.98 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 310 | 123.99 | precipitation | 0.1 | 270 | > th | dose independent | sin | 23 | NA |
| 314 | 124.00 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 319 | 124.02 | precipitation | 0.1 | 270 | < th | dose independent | sin | 23 | NA |
| 321 | 124.02 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 23 | NA |
| 346 | 124.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 16 |
| 371 | 124.33 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 19 |
| 395 | 124.46 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 403 | 124.48 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 413 | 124.57 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 6 |
| 432 | 124.71 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 21 |
| 434 | 124.71 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 502 | 124.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 508 | 124.87 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 3 |
| 511 | 124.87 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 3 |
| 515 | 124.90 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 5 |
| 521 | 124.91 | wind | 7.0 | 10 | > th | dose dependent | rect. | 11 | 6 |
| 570 | 125.04 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 11 |
| 586 | 125.07 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 610 | 125.12 | wind | 9.0 | 30 | > th | dose independent | sin | 22 | NA |
| 646 | 125.25 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 694 | 125.28 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 18 |
| 710 | 125.30 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 777 | 125.33 | wind | 9.0 | 30 | > th | dose independent | no | NA | NA |
| 858 | 125.33 | wind | 9.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 859 | 125.33 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 915 | 125.38 | wind | 9.0 | 30 | > th | dose dependent | sin | 0 | NA |
| 919 | 125.39 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 927 | 125.41 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 8 |
| 951 | 125.47 | wind | 9.0 | 30 | < th | dose independent | sin | 0 | NA |
| 983 | 125.52 | temperature | 20.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 999 | 125.56 | wind | 9.0 | 30 | > th | dose dependent | no | NA | NA |