Os02g0167100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 3-mercaptopyruvate sulfurtransferase precursor (EC 2.8.1.1).
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Os02g0167100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 3-mercaptopyruvate sulfurtransferase precursor (EC 2.8.1.1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.3 | 0.374 | 11.3 | -2.56 | 1.31 | 0.941 | -0.38 | -0.87 | -0.52 | 2.28 | 22.48 | 1196 | -- | -- |
| 63.75 | 0.372 | 11.3 | -2.32 | 1.32 | 0.854 | -0.486 | -- | -0.454 | 2.2 | 22.4 | 1237 | -- | -- |
| 63.56 | 0.371 | 11.3 | -2.63 | 1.27 | 0.989 | -- | -1.2 | -0.513 | 2.45 | 22.94 | 1126 | -- | -- |
| 64.54 | 0.374 | 11.3 | -2.31 | 1.33 | 0.844 | -- | -- | -0.447 | 2.27 | 22.36 | 1234 | -- | -- |
| 155.23 | 0.58 | 11.4 | -2.91 | -- | 1.52 | -- | -2.42 | -0.568 | -- | 23.9 | 1109 | -- | -- |
| 87.89 | 0.44 | 11.3 | -2.04 | 1.46 | -- | -0.339 | -- | -0.272 | 2.16 | -- | -- | -- | -- |
| 88.31 | 0.44 | 11.3 | -2.03 | 1.47 | -- | -- | -- | -0.271 | 2.2 | -- | -- | -- | -- |
| 158.44 | 0.586 | 11.3 | -2.38 | -- | 1.33 | -- | -- | -0.439 | -- | 23.74 | 1119 | -- | -- |
| 193.47 | 0.648 | 11.2 | -- | 1.38 | 0.243 | -- | -- | -0.0327 | 2.16 | 28.01 | 2656 | -- | -- |
| 216.4 | 0.687 | 11.3 | -1.96 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 196.43 | 0.656 | 11.2 | -- | 1.43 | -- | -- | -- | -0.0451 | 2.17 | -- | -- | -- | -- |
| 277.95 | 0.779 | 11.2 | -- | -- | -1.25 | -- | -- | 0.098 | -- | 24.1 | 1104 | -- | -- |
| 318.14 | 0.833 | 11.2 | -- | -- | -- | -- | -- | -0.0175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 11 | 59.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 15 | 59.53 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 85 | 62.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 94 | 62.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 17 |
| 169 | 63.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 201 | 63.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 220 | 63.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 254 | 63.97 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 332 | 64.15 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 4 |
| 336 | 64.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 366 | 64.25 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 372 | 64.26 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 3 |
| 381 | 64.28 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |
| 384 | 64.29 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 489 | 64.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 611 | 64.72 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 652 | 64.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 826 | 64.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 842 | 64.95 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 854 | 64.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 889 | 64.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |