Os02g0166600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0166600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.47 | 0.368 | 10.4 | 0.549 | 0.791 | 0.862 | -0.665 | 0.138 | 0.115 | 3.88 | 20 | 10 | -- | -- |
| 61.17 | 0.364 | 10.4 | 0.545 | 0.794 | 0.87 | -0.547 | -- | 0.106 | 3.92 | 20 | 5 | -- | -- |
| 61.94 | 0.367 | 10.4 | 0.542 | 0.846 | 0.779 | -- | -0.127 | 0.101 | 3.46 | 20 | 5 | -- | -- |
| 61.96 | 0.367 | 10.4 | 0.54 | 0.821 | 0.821 | -- | -- | 0.106 | 3.64 | 20 | 5 | -- | -- |
| 73.59 | 0.4 | 10.4 | 0.56 | -- | 1.24 | -- | 0.219 | 0.188 | -- | 11.63 | 206 | -- | -- |
| 73.95 | 0.403 | 10.4 | 0.526 | 1.47 | -- | -0.109 | -- | 0.107 | 1.77 | -- | -- | -- | -- |
| 74 | 0.403 | 10.4 | 0.53 | 1.47 | -- | -- | -- | 0.107 | 1.76 | -- | -- | -- | -- |
| 72.31 | 0.396 | 10.4 | 0.576 | -- | 1.26 | -- | -- | 0.141 | -- | 8.733 | 253 | -- | -- |
| 69.9 | 0.389 | 10.4 | -- | 0.827 | 0.806 | -- | -- | 0.0477 | 3.57 | 20 | 5 | -- | -- |
| 204.55 | 0.668 | 10.4 | 0.59 | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
| 81.4 | 0.422 | 10.4 | -- | 1.48 | -- | -- | -- | 0.0482 | 1.77 | -- | -- | -- | -- |
| 80.27 | 0.417 | 10.4 | -- | -- | 1.28 | -- | -- | 0.0867 | -- | 10 | 258 | -- | -- |
| 213.73 | 0.682 | 10.4 | -- | -- | -- | -- | -- | 0.0749 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.54 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 2 | 56.58 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 7 | 56.91 | wind | 1e+00 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 23 | 59.02 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 25 | 59.23 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 27 | 59.25 | wind | 7e+00 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 31 | 59.29 | wind | 9e+00 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 34 | 59.33 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 36 | 59.39 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 39 | 59.46 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 40 | 59.46 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 41 | 59.46 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 43 | 59.52 | wind | 3e+00 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 47 | 59.56 | wind | 5e+00 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 48 | 59.57 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 51 | 59.58 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 52 | 59.59 | wind | 3e+00 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 54 | 59.61 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 56 | 59.62 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 60 | 59.65 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 61 | 59.65 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 62 | 59.66 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 65 | 59.74 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 66 | 59.74 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 83 | 59.85 | wind | 5e+00 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 87 | 59.88 | humidity | 9e+01 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 89 | 59.89 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 101 | 59.95 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 119 | 60.05 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 140 | 60.13 | humidity | 8e+01 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 165 | 60.26 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 202 | 60.42 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 349 | 60.95 | humidity | 9e+01 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 388 | 61.09 | wind | 3e+00 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 391 | 61.10 | humidity | 8e+01 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 406 | 61.12 | wind | 3e+00 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 419 | 61.14 | wind | 3e+00 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 424 | 61.15 | humidity | 8e+01 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 425 | 61.15 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 429 | 61.15 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 444 | 61.20 | humidity | 8e+01 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 463 | 61.24 | radiation | 1e+00 | 720 | < th | dose dependent | rect. | 7 | 10 |
| 485 | 61.29 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 507 | 61.33 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 537 | 61.39 | humidity | 9e+01 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 540 | 61.39 | radiation | 2e+01 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 568 | 61.49 | radiation | 2e+01 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 576 | 61.51 | radiation | 2e+01 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 578 | 61.52 | radiation | 2e+01 | 10 | < th | dose dependent | no | NA | NA |
| 588 | 61.53 | radiation | 2e+01 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 621 | 61.59 | humidity | 9e+01 | 720 | > th | dose independent | rect. | 6 | 14 |
| 630 | 61.60 | atmosphere | 1e+03 | 270 | > th | dose independent | rect. | 24 | 19 |
| 652 | 61.64 | wind | 5e+00 | 43200 | < th | dose dependent | sin | 8 | NA |
| 675 | 61.68 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 693 | 61.70 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 751 | 61.79 | temperature | 2e+01 | 90 | > th | dose independent | rect. | 16 | 15 |
| 756 | 61.80 | wind | 1e+00 | 43200 | > th | dose dependent | sin | 8 | NA |
| 810 | 61.87 | wind | 1e+00 | 14400 | > th | dose dependent | rect. | 24 | 3 |
| 846 | 61.92 | atmosphere | 1e+03 | 270 | > th | dose independent | rect. | 23 | 21 |
| 853 | 61.93 | wind | 9e+00 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 861 | 61.94 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 864 | 61.94 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 868 | 61.94 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 878 | 61.97 | radiation | 2e+01 | 10 | < th | dose dependent | sin | 23 | NA |
| 960 | 62.07 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 962 | 62.07 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 10 | 4 |