Os02g0165900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0165900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.6 | 0.357 | 12 | -0.633 | 0.694 | 0.388 | -0.491 | 0.363 | 0.345 | 17.9 | 29.07 | 4196 | -- | -- |
| 57.63 | 0.354 | 11.9 | -0.552 | 0.697 | 0.421 | -0.486 | -- | 0.359 | 17.9 | 29.05 | 4195 | -- | -- |
| 58.13 | 0.355 | 12 | -0.627 | 0.689 | 0.381 | -- | 0.351 | 0.345 | 17.7 | 28.99 | 4195 | -- | -- |
| 58.16 | 0.355 | 11.9 | -0.548 | 0.695 | 0.415 | -- | -- | 0.36 | 17.7 | 29.08 | 4247 | -- | -- |
| 82.77 | 0.424 | 12 | -0.688 | -- | 0.405 | -- | 0.623 | 0.313 | -- | 28.86 | 4209 | -- | -- |
| 63.59 | 0.374 | 11.9 | -0.667 | 0.709 | -- | -0.379 | -- | 0.349 | 17.7 | -- | -- | -- | -- |
| 63.91 | 0.374 | 11.9 | -0.665 | 0.707 | -- | -- | -- | 0.348 | 17.6 | -- | -- | -- | -- |
| 83.07 | 0.424 | 11.9 | -0.596 | -- | 0.414 | -- | -- | 0.365 | -- | 28.81 | 4211 | -- | -- |
| 65.18 | 0.376 | 11.9 | -- | 0.688 | 0.548 | -- | -- | 0.44 | 17.8 | 27.8 | 4173 | -- | -- |
| 89.9 | 0.443 | 11.9 | -0.688 | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
| 75.55 | 0.407 | 11.9 | -- | 0.718 | -- | -- | -- | 0.422 | 17.5 | -- | -- | -- | -- |
| 85.32 | 0.43 | 11.9 | -- | -- | 0.61 | -- | -- | 0.645 | -- | 24.09 | 40217 | -- | -- |
| 102.38 | 0.472 | 11.9 | -- | -- | -- | -- | -- | 0.407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.30 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 56.06 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 4 | 56.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 7 | 56.54 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 14 | 56.81 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 26 | 56.87 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 27 | 56.88 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 28 | 56.91 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 38 | 56.95 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 39 | 56.96 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 43 | 57.05 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 4 |
| 46 | 57.11 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 47 | 57.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 51 | 57.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 52 | 57.18 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 54 | 57.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 55 | 57.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 58 | 57.20 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 70 | 57.20 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 86 | 57.22 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 99 | 57.25 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 107 | 57.30 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 114 | 57.37 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 118 | 57.39 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 130 | 57.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 13 | 20 |
| 138 | 57.47 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 157 | 57.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 159 | 57.51 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 194 | 57.62 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 197 | 57.62 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 217 | 57.67 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 227 | 57.68 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 231 | 57.69 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 246 | 57.72 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 262 | 57.75 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 270 | 57.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 279 | 57.76 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 287 | 57.77 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 330 | 57.82 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 358 | 57.84 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 23 | 15 |
| 362 | 57.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 370 | 57.85 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 383 | 57.86 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 390 | 57.86 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 400 | 57.87 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 425 | 57.88 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 434 | 57.89 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 545 | 57.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 589 | 57.98 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 4 |
| 594 | 57.98 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 603 | 57.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 605 | 58.00 | temperature | 30.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 612 | 58.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 648 | 58.03 | temperature | 25.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 656 | 58.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 18 |
| 658 | 58.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 662 | 58.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 664 | 58.05 | temperature | 30.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 677 | 58.06 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 685 | 58.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 4 |
| 730 | 58.09 | temperature | 25.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 767 | 58.11 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 826 | 58.14 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 864 | 58.16 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 865 | 58.16 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 873 | 58.17 | temperature | 30.0 | 270 | < th | dose independent | sin | 2 | NA |
| 874 | 58.17 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 897 | 58.17 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 15 |
| 990 | 58.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 6 |