Os02g0165500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0165500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.21 | 0.396 | 2.93 | -0.0815 | 0.00091 | -6.04 | 0.699 | -26.6 | 0.00182 | 18 | 9.13 | 2 | 7.66 | -- |
| 87.21 | 0.435 | 2.98 | 0.0232 | 0.0293 | 1.8 | 0.454 | -- | 0.0152 | 19.3 | 8.749 | 2 | 6.43 | -- |
| 71.97 | 0.395 | 2.93 | -0.103 | 0.0648 | -6.34 | -- | -27.7 | -0.00312 | 23.6 | 8.916 | 2 | 7.17 | -- |
| 73.75 | 0.403 | 2.98 | 0.0157 | 0.0643 | 4.46 | -- | -- | -0.00826 | 22.6 | 9.6 | 3 | 7.97 | -- |
| 72.22 | 0.396 | 2.93 | -0.1 | -- | -6.52 | -- | -28.6 | 5.12e-05 | -- | 8.9 | 2 | 7 | -- |
| 93.3 | 0.453 | 2.98 | -0.0605 | 0.0918 | -- | 0.116 | -- | -0.0287 | 20.7 | -- | -- | -- | -- |
| 93.34 | 0.452 | 2.98 | -0.0645 | 0.0912 | -- | -- | -- | -0.0288 | 20.9 | -- | -- | -- | -- |
| 74 | 0.402 | 2.98 | 0.0171 | -- | 4.48 | -- | -- | -0.00788 | -- | 9.6 | 3 | 7.97 | -- |
| 73.75 | 0.402 | 2.98 | -- | 0.0644 | 4.46 | -- | -- | -0.01 | 22.6 | 9.6 | 3 | 7.97 | -- |
| 93.81 | 0.453 | 2.98 | -0.0645 | -- | -- | -- | -- | -0.0295 | -- | -- | -- | -- | -- |
| 93.45 | 0.452 | 2.98 | -- | 0.0913 | -- | -- | -- | -0.0217 | 20.8 | -- | -- | -- | -- |
| 74.01 | 0.402 | 2.98 | -- | -- | 4.47 | -- | -- | -0.00981 | -- | 9.6 | 3 | 7.97 | -- |
| 93.92 | 0.452 | 2.98 | -- | -- | -- | -- | -- | -0.0223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.60 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 70.60 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 26 | 71.01 | wind | 9 | 90 | > th | dose independent | rect. | 18 | 16 |
| 57 | 71.19 | wind | 9 | 90 | > th | dose dependent | rect. | 18 | 8 |
| 179 | 73.26 | radiation | 1 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 277 | 78.72 | radiation | 1 | 30 | > th | dose independent | rect. | 18 | 1 |
| 299 | 78.95 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 300 | 79.44 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 336 | 80.46 | wind | 9 | 10 | > th | dose dependent | sin | 11 | NA |
| 452 | 83.47 | radiation | 40 | 270 | > th | dose independent | rect. | 15 | 1 |
| 469 | 83.47 | radiation | 40 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 509 | 84.08 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 2 |
| 539 | 84.51 | temperature | 25 | 90 | < th | dose independent | rect. | 17 | 1 |
| 544 | 84.62 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 571 | 84.62 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 598 | 84.84 | temperature | 25 | 90 | < th | dose independent | rect. | 16 | 3 |
| 605 | 85.03 | radiation | 20 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 619 | 85.04 | humidity | 80 | 30 | < th | dose independent | rect. | 17 | 1 |
| 626 | 85.14 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 649 | 85.33 | humidity | 60 | 270 | < th | dose independent | rect. | 16 | 1 |
| 682 | 85.60 | radiation | 1 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 698 | 85.85 | wind | 1 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 719 | 86.12 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 16 | 2 |
| 731 | 86.19 | humidity | 70 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 745 | 86.30 | wind | 3 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 781 | 86.59 | radiation | 1 | 90 | < th | dose independent | rect. | 17 | 1 |
| 829 | 86.70 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 856 | 86.82 | humidity | 80 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 875 | 86.93 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 880 | 86.99 | radiation | 1 | 90 | < th | dose independent | rect. | 15 | 3 |
| 936 | 87.24 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 943 | 87.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 944 | 87.28 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 956 | 87.33 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 973 | 87.42 | wind | 1 | 270 | < th | dose independent | rect. | 15 | 1 |
| 988 | 87.50 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 1 |
| 993 | 87.53 | humidity | 70 | 30 | > th | dose independent | rect. | 17 | 1 |