Os02g0164300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os02g0164300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.27 | 0.421 | 10.7 | -1.06 | 1.31 | -0.733 | 1.37 | -0.565 | -0.346 | 5.18 | 20.12 | 985 | -- | -- |
| 80.96 | 0.419 | 10.7 | -0.965 | 1.32 | -0.667 | 1.35 | -- | -0.325 | 5.19 | 20.3 | 939 | -- | -- |
| 84.84 | 0.429 | 10.7 | -1.04 | 1.32 | -0.732 | -- | -0.467 | -0.344 | 5.19 | 20.28 | 947 | -- | -- |
| 85.39 | 0.43 | 10.7 | -0.959 | 1.32 | -0.665 | -- | -- | -0.326 | 5.21 | 20.36 | 948 | -- | -- |
| 167.21 | 0.602 | 10.7 | -1.04 | -- | -0.789 | -- | -0.666 | -0.282 | -- | 20.8 | 512 | -- | -- |
| 91.48 | 0.448 | 10.7 | -1.22 | 1.31 | -- | 1.45 | -- | -0.464 | 5.44 | -- | -- | -- | -- |
| 96.72 | 0.461 | 10.8 | -1.22 | 1.32 | -- | -- | -- | -0.47 | 5.47 | -- | -- | -- | -- |
| 127.78 | 0.526 | 10.7 | -0.959 | -- | -0.999 | -- | -- | -0.276 | -- | 27.44 | 333 | -- | -- |
| 107.2 | 0.482 | 10.7 | -- | 1.25 | -0.956 | -- | -- | -0.211 | 5.1 | 20.6 | 1058 | -- | -- |
| 186.84 | 0.639 | 10.8 | -1.17 | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
| 135.86 | 0.545 | 10.7 | -- | 1.3 | -- | -- | -- | -0.334 | 5.51 | -- | -- | -- | -- |
| 151.64 | 0.574 | 10.7 | -- | -- | -1.09 | -- | -- | -0.157 | -- | 27.49 | 336 | -- | -- |
| 223.26 | 0.697 | 10.7 | -- | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.22 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 10 |
| 3 | 77.74 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 2 |
| 5 | 77.82 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 11 |
| 7 | 77.90 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 4 |
| 15 | 78.16 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 7 |
| 30 | 78.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 53 | 78.84 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 86 | 79.18 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 119 | 79.43 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 147 | 79.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 174 | 79.79 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 19 |
| 184 | 79.84 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 221 | 80.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 235 | 80.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 243 | 80.20 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 276 | 80.28 | temperature | 30 | 270 | < th | dose dependent | sin | 4 | NA |
| 295 | 80.36 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 346 | 80.55 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 403 | 80.71 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 505 | 80.98 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 13 |
| 532 | 81.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 533 | 81.07 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 622 | 81.28 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 647 | 81.32 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 657 | 81.35 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 751 | 81.56 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 764 | 81.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 771 | 81.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 776 | 81.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 825 | 81.69 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 23 |
| 851 | 81.74 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 909 | 81.82 | humidity | 90 | 4320 | > th | dose independent | rect. | 6 | 1 |