Os02g0161800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase precursor (EC 1.11.1.7).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0161800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Peroxidase precursor (EC 1.11.1.7).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.28 | 0.795 | 2.97 | 0.00148 | 0.192 | 0.889 | 0.529 | 2.66 | -0.0301 | 22.1 | 25.2 | 858 | -- | -- |
| 294.56 | 0.799 | 2.92 | 0.449 | 0.179 | 0.646 | -0.0397 | -- | 0.0652 | 22 | 26.2 | 857 | -- | -- |
| 287.24 | 0.789 | 2.97 | 0.0248 | 0.175 | 0.866 | -- | 2.39 | -0.0139 | 22.2 | 25.06 | 883 | -- | -- |
| 294.57 | 0.799 | 2.92 | 0.457 | 0.182 | 0.655 | -- | -- | 0.0711 | 21.9 | 26.24 | 855 | -- | -- |
| 288.95 | 0.792 | 2.97 | 0.0474 | -- | 0.857 | -- | 2.38 | -0.0268 | -- | 24.36 | 1009 | -- | -- |
| 300.82 | 0.813 | 2.95 | 0.265 | 0.0795 | -- | -0.0353 | -- | -0.0732 | 20.7 | -- | -- | -- | -- |
| 300.82 | 0.812 | 2.95 | 0.267 | 0.0797 | -- | -- | -- | -0.0732 | 20.7 | -- | -- | -- | -- |
| 295.68 | 0.801 | 2.91 | 0.492 | -- | 0.575 | -- | -- | 0.0622 | -- | 24 | 2190 | -- | -- |
| 299.38 | 0.806 | 2.93 | -- | 0.158 | 0.506 | -- | -- | -0.0105 | 22.3 | 25.99 | 859 | -- | -- |
| 301.18 | 0.811 | 2.94 | 0.266 | -- | -- | -- | -- | -0.0738 | -- | -- | -- | -- | -- |
| 302.69 | 0.814 | 2.95 | -- | 0.0791 | -- | -- | -- | -0.103 | 21 | -- | -- | -- | -- |
| 300.32 | 0.81 | 2.94 | -- | -- | 0.37 | -- | -- | -0.0352 | -- | 25.99 | 859 | -- | -- |
| 303.05 | 0.813 | 2.95 | -- | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.62 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 2 | 276.87 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 16 | 278.95 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 21 | 279.72 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 22 | 279.77 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 39 | 280.08 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 50 | 280.34 | temperature | 25.0 | 30 | < th | dose independent | rect. | 12 | 2 |
| 63 | 280.60 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 66 | 280.72 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 73 | 280.93 | radiation | 10.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 77 | 281.04 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 81 | 281.21 | wind | 5.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 96 | 281.73 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 98 | 281.89 | wind | 5.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 102 | 282.15 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 107 | 282.38 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 110 | 282.38 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 114 | 282.51 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 8 | 7 |
| 116 | 282.64 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 122 | 282.75 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 6 |
| 130 | 282.88 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 169 | 284.32 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 2 |
| 222 | 285.10 | wind | 5.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 242 | 285.34 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 244 | 285.34 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 2 |
| 265 | 285.53 | wind | 5.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 271 | 285.61 | wind | 7.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 274 | 285.67 | wind | 5.0 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 289 | 285.80 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 344 | 286.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 349 | 286.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 350 | 286.35 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 401 | 286.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 415 | 286.84 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 416 | 286.85 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 22 |
| 417 | 286.86 | wind | 5.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 428 | 286.91 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 22 |
| 446 | 286.99 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 454 | 287.01 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 456 | 287.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 475 | 287.07 | wind | 5.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 483 | 287.10 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 486 | 287.11 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 18 | 4 |
| 488 | 287.11 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 494 | 287.14 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 499 | 287.16 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 18 | 5 |
| 502 | 287.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 18 |
| 513 | 287.20 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 538 | 287.28 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 1 |
| 575 | 287.36 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 14 |
| 591 | 287.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 595 | 287.43 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 632 | 287.47 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 643 | 287.49 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 17 |
| 648 | 287.50 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 17 |
| 656 | 287.52 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 668 | 287.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 681 | 287.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 703 | 287.66 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 716 | 287.69 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 725 | 287.71 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 732 | 287.72 | radiation | 10.0 | 10 | < th | dose independent | rect. | 11 | 15 |
| 751 | 287.77 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 756 | 287.77 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 8 |
| 802 | 287.90 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 15 |
| 816 | 287.94 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 827 | 287.96 | atmosphere | 1010.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 859 | 288.02 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 882 | 288.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 22 |
| 891 | 288.12 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 909 | 288.17 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 911 | 288.17 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 961 | 288.28 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 967 | 288.30 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 8 |
| 986 | 288.33 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 6 |